Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_15, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGTACACCCCCTTGGCGTGCAGCGCGGCGATCAGCTCGCCCAGTTGCGTCCGGACTGCGTCGCCGCACTCCGGGTCGTTGCGGTCGAGTTGGCGGAGG GTCTGCCCCGGTAGCGGCTCGTAGTGCACCGCGTCGCGCTGGATATGTGGGATCCGCAATACGTCCAGCACCTTCGGGCAGACGATGCCGCGCCGCGCCA GTTCGCTGGCGTTGCGGGCGAAGCGCTCCGCATAGGGGAACAGGGCTGCGGAGGAAATCAGGCGCTTGCGGCGAAACAGTTTGAGGAAGGACCCGTCGCG CAGACGCAGAACCTTGTCCCCATGACCATCGGCTTCCAGCACTTCTGCGTTGTCACGCAACTGCAAGTAGGAGGGGTAGTCTATGACTCGCATGCGAGCT CCTGAACGAACGGCCCGCCATCTTACCCCAACACGCCTTCCAGGCGGAGTGATGGAGGTCCTGTGCTACACTCCGGGACCTTTTCAGCATGTAAGAAACC
|
|
DNA Sequence for Gene |
>NQ06_RS20500
ATGAGCGATAGTCCTCAGAATCCCGGACCTTCCAGTCTCAAGATCTATTTCCGCCTGTTGGGCTACGTGAAGCCCTACATCGGAATGTTCCTACTCAGCA TCGTCGGTTTCCTGATCTTCGCCTCGACCCAGCCGATGCTGGCGGGCATCCTCAAGTATTTCGTCGACGGCCTCTCCAATCCTGACGCGGCATTGTTTCC GAATGTGCAGTGGCCCTGGTTGCGCGACTTGCACCTGGTCTACGCGGTGCCGTTGCTGATCATCCTGATCGCTGCCTGGCAGGGGCTGGGCTCGTTCCTC GGCAACTTCTTCCTCGCCAAGGTTTCCCTGGGGCTGGTGCATGACCTGCGGGTCGCCCTGTTCAACAAGCTGCTGGTGCTGCCGAACCGCTATTTCGACA CGCACAGCTCCGGCCACCTGATCTCGCGCATCACCTTCAACGTGACCATGGTCACCGGAGCGGCCACGGATGCCATCAAGGTGGTGATCCGTGAGGGCCT GACCGTGGTCTTCCTGTTCCTCTACCTGCTGTGGATGAACTGGAAGCTGACCCTGGTGATGCTGGCGATCCTGCCGGTCATCGCGGTGATGGTGACTACC GCCAGCCGCAAGTTCCGCAAGCAGAGCAAGAAGATCCAGGTGGCCATGGGCGACGTCACCCACGTCGCCTCGGAAACCATCCAGGGCTACCGGGTGGTGC GCAGCTTCGGCGGCGAAGCCTATGAAGAGAAGCGCTTCCTCGACGCCAGCCAGAGCAATACCGACAAGCAGTTGCGGATGACCAAGACCGGCGCGGTCTA CACGCCGATGCTGCAATTGGTGATCTACGTCGCCATGGCGATACTGATGTTCCTCGTGCTGTGGCTGCGCGGGGACGCCTCGGCCGGCGATCTGGTGGCC TATATCACCGCGGCGGGCCTGTTGCCCAAGCCGATCCGCCAGCTTTCCGAGGTCAGTTCCACGGTCCAGCGCGGCGTCGCCGGCGCCGAGAGCATCTTCG AGCAGCTCGACGAAGCGGCGGAGGAAGACCAGGGTACCGTCGAGAAGGAGCGGGTCAGCGGGCGCCTGGAAGTGCGCAACCTGAGCTTCCGTTATCCCGG AACCGACAAGCAGGTGCTGGATGACATCAGTTTCATCGCCGAGCCCGGGCAGATGATCGCCCTGGTCGGCCGTTCCGGTAGCGGCAAATCGACCCTGGCC AACCTGGTTCCGCGCTTTTACCAGCACAATAACGGCAAGATCCTCCTTGATGGCGTTGAAGTCGAGGATTATCGCCTGCGCAACCTGCGCCGCCACATCG CCCTGGTGACCCAGCAGGTCACGCTGTTCAACGACAGCGTGGCCAACAACATCGCCTACGGCGACCTGGCTGGCGCGCCGCGCGAGGAAATCGAGCGGGC GGCGAAGGCTGCCAACGCCAAGGAGTTCATCGACAACCTGCCGCAAGGCTTCGACACCGAGGTCGGCGAGAATGGCGTGCTGCTTTCCGGCGGCCAGCGC CAGCGTCTGGCGATCGCCCGGGCGCTGCTCAAGGACGCGCCCCTGCTGATCCTCGACGAGGCGACCTCGGCGCTGGACACCGAGTCGGAGCGGCATATCC AGGCGGCGCTGGACGAAGTGATGAAGGGGCGCACCACCCTGGTGATCGCCCACCGCCTGTCGACCATCGAGAAGGCCGACCTGATCCTGGTGATGGACCA GGGGCAGATCGTCGAGCGCGGCAGCCACGCCGAGCTGCTGGCGCAGAACGGCCATTATGCGCGGCTGCATGCGATGGGACTGGATGAGCAGGCGCCGGCG CCTGTCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TAAACTGGGCGTCTGCCCCGAGAGGTTGTTTGGAGTTCCCATGAAGTTGTCCATGCCCCGTTTCGACCAGGCCCCGGTGTTGGTGGTCGGTGATGTGATG CTCGACCGCTACTGGCATGGCGCGACTTCGCGCATTTCGCCGGAGGCCCCGGTGCCGGTGGTCCGCGTCGAACAGCACGAGGACCGCCCCGGCGGCGCCG CCAACGTCGCGCTGAACATCGCCGCGCTGGGCGCGCAGGCCTTGCTGGTCGGCGTCACCGGCCGCGACGAGGCCGCCGACAGCCTGGCCAACAGCCTCAA GGCCGCTGGAGTGGACGCGCGCTTCCAGCGCATCGATAGCCAGCCGACCATCGTCAAGCTGCGGGTCATGAGTCGCCACCAGCAACTGCTGCGGGTCGAC TTCGAGGAACCGTTCCGCACCGACGCGGCGGCCCTGGCCGTGGACGTCGGGTCGCTGCTGGCCAAGGTCAAGGTGCTGGTGCTGTCCGACTACGGCAAGG
|
|
Amino Acid Sequence |
>ATP-binding protein
MSDSPQNPGPSSLKIYFRLLGYVKPYIGMFLLSIVGFLIFASTQPMLAGILKYFVDGLSNPDAALFPNVQWPWLRDLHLVYAVPLLIILIAAWQGLGSFL GNFFLAKVSLGLVHDLRVALFNKLLVLPNRYFDTHSSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFLYLLWMNWKLTLVMLAILPVIAVMVTT ASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYEEKRFLDASQSNTDKQLRMTKTGAVYTPMLQLVIYVAMAILMFLVLWLRGDASAGDLVA YITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFEQLDEAAEEDQGTVEKERVSGRLEVRNLSFRYPGTDKQVLDDISFIAEPGQMIALVGRSGSGKSTLA NLVPRFYQHNNGKILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDLAGAPREEIERAAKAANAKEFIDNLPQGFDTEVGENGVLLSGGQR QRLAIARALLKDAPLLILDEATSALDTESERHIQAALDEVMKGRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELLAQNGHYARLHAMGLDEQAPA PVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|