Pseudomonas aeruginosa AZPAE12145, NQ06_RS18940
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGACTTCCTCGACCCGCACGGTGAAGGCGCACGCTGGCAGTCCTACCTGGAAGCGCTGGACGCCTTCTTCCTGCGCGGACAGCAGAAAGGCGTGTTTCG CATCGACATCACGGCGGCCGTGTTCACCGAACTGTTCATCACCCTGGTCTACGGCATGGTCGATGCGGAACGTCGCGGACGGGCGGCCAGCTCCAATTCC GCGCATACCCTGGAGCAGATGTTCCTCCATGGCGCCTCCAATCCGGCGCGCTCCTGACCCTCGCGCCCGCGGCGGCGCCCCTCTCGTCGCCGCATGGCAC GGACCGATCCGCGTGCCGTCGACTTCGGCCGCCCGGAGGCCTGCTCGACACTCGGGAAGATCAGTCGTCACCGGTCCTGCGACAAAGTGCCTCGACAGCC GGAAAGGACCGTGACGCTCGTCGGCGATACTGGCACTTGGCCTTGCTTCCGGGCATCCTAACTGTCTACCGAATCACACCTCCCCCAGGAATTCCGGTCA
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| DNA Sequence for Gene |
>NQ06_RS18940
GTGTCGACCCCCTCGCTAACCCCGTCGCCGCCTCCCGCCGGCGACCCACTGACCGTACCCGACCGACCGGCAGCCAAGGCTGGCCTGCTGTTGCTGGTCC TGTTGATGCTCGGCCTGCTGCTCTGGCAGATGAGCCAGGAGCTGCGCCAGCAGGAACGCTTCGAACACGAGCGAGCCGCGGCCCAGCTCGATCGTCTCAA CGACCGCCTGTCCCTGACCCTCGAACTCAAGGCGCGCACCGCCCTCGCCCTGCTCCCGGGCGTGCCCCCCAGCGAGCGTGGCGAGATACAGGGCAGGCTG TTGTCGCGCATCAGCGATGCGCTGCCGCAGGTGCGCCAGTTGCAATGGGTGGACAGCGCCCTGCAGACGGACAGCCCGTCGCCGGAAACGACGCTGCCCG AGCAGTTGCGCCAGCACGCCGGCTCCGGCCTCTACCACTATTGCCTCGACCCGCGCGACGGCGAATCCCTCTACCTGACCCTGCGCGAACCCGGCAGCCG CCGCGACAGTGGCTTCTGGCTGTTGCACCTGGCCAGCGACAGCCTCGCCCAGTGGAGTCCCGACCTGCCCACCGGCAACCTGCTCTGGCGCCTGGAAGAC CAATACGCCGGGCGGGTGCTCTGGCATACCCCGGGGAGCACGGCGCTGCTCGACGACATGCAGACCCTCGGCGTGGAACCGCTGCGCAACAGCGACTGGC AGCTTCGCGGGCTCTACGACAGCACGCGAGTGCGGCTCGGCCTGCTGCCGGGAATCGGCGGCGAGCTGGCGATCTTCCTCCTGCTGGTCGGCGTCACCGT GTACATGCTGCTGCGCCTGCACCGCGAGCAGCAAGGCCTGCGCGCCATGACCCTGGCCTCGCAGCGCAGCCTGCGCCAGGCGGCCACGGCACTGGCGGCG ATCGACGAGCGGGTGCTGGTGACCCGCGCCGACGGCCGCCTCAGCTACCTCAATCCCCAGGCCGAACGCCTCTTCGGCATCAGTTCGGCCCAGGCCCGCC AGCATCATCTGCTGGGCCTGCTGCCAGACCTCGAGCCAGGCTGGCTGACGGACGCCGGTGGCGACGGCGAGACTCGTAGCGAGCTGCTGCCGCTGCGGGT GCGCGGCGAGCCGCGGACGTTCACCCTCAGCCGCCATCCGCTGGCCAGCTATCCGGCGCTCGCCGACCAGGCCTGGACCCTCCGCGAGCAGATACTCCAG GGCGGGCAGGTCTGGGTGTTGCGCGACGTCACCGAGGAACAGCACGCCCTCGGCGTCCTGGAGGAAACCCGGCGGCGCTACCAGGACATCTTCGAAGGGG TCGGCGTGGCCCTCTGCGTGCTCGACCTCTCCGCCCTGCGCCAGGCTCTTGTGGAGCAAGGCCTGGACAGCTGCGCCGCACTGCGCGCCTGGCTCGCCGG CGAACCCGGGCGGCAGCAGGCGCTGCTGGAGCGGATCCGCATCACCGAGATCAACGATGTCAGTCGCCGCCTGCTACAGATCGATTCCACCGAACAGGCC TGGCAGCGCTTGCTCGACCACGGCCCGCTACAACCGGACAGCCTGCGCCTGCAGGTGATCGAGGCGCTCATCGAGCGCCGGCCGGTACTCGAACTTGAAG CCACGCTGCGCTGCGGCAAGAGCACGCCGCGGCACCTGTGGTTGCAACTGCGCCTGCCGGAAAACCCCGGCGAATGGCATGCGGTGACCCTCAGCCTGTC CGACGTCACCAGTCGCAAGGAAGTCGAACTGTCGCTGATCGAGCGCGAGAAGTTCTGGTCGGACGCGGTCCAGGCGGTGCCCGATACCCTCTACATCCAC GACCTGCACGCGCGCCGGGTGATCTTCAGCAACCATCACCTGGGCCAGCAACTGGGCTACAACCAGGAAGAACTGGCGCGGATGGGCGAGAACTTCTGGG AAACCCTGCTGCACCCCGACGACCAGGAATACTACTGGCGCATCCGCAACCTGCAGCACGTGGTCGGCGACGGCCTGCTGCTCGACAGCCAGTTGCGCTG GCGCCACCGCGACGGCCGCTGGCACTGGTTCGACATCCGCGAGCAGGCCTTCAGCCGCGACCGCAGCGGTCGCGTGGCGCGCCTGATCGGCGTGGCCAAG GACATCACCTTCACCGTCGAGGCGAACAACGCGCTGCGCGAGAACGGCCGACGCTACCGCATGCTGGCGGAAAACATCAGCGACGTGATCTTCTCCACCG ACGCCGAACTCAACGCCAGCTACGTCAGCCCCTCGGTACAGCACGTGTTCGGCTACAGCCCGGAATGGGCGCTGCTCAACGGCCTCCATCAAACCGCCAC CAACCCGCGCCAGCTCGGCCGCCTGAACGGCCTGCTGCGCCGCGTGCGGCACGCCATCGGCGACCGCCAGAAGCTCGCCGAGCTGCGGGAAAACCCTGGC CAGCATCTGTTCGCCCTCGACTGCCTGCGCGCCGACGGACGCAAGATTCCCATCGAACTGCGGATCGTCCTGATGTGGGACGAGCACGACCGCTTCGAAG GCCTGCTCGGCATCGCCCGCGACATCAGCCAGCAGCGCCGCGCCGAACGCGAGCTGCGGATGGCGGCGACGGTATTCGAACACTCCACGGCGGCGATCAT GGTCACCGACCCGGCCGGCTACATCGTCCAGGTCAACGATTCCTTCTCGCGCCTGACCGGCTACAGCCCGGCCGACGTGCTCGACCAACAGCCGCGCCTG CTCACCGCCGACCGCCAGGAAGCCAACCAGCTCAAGCACGTGCTCGCCAGCCTGCAGCACAGCGGCAGCTGGGAAGGCGAGATCCTGCAGAAGCGCAAGA CCGGCGAGCTCTATCCATCCTGGGTCGGCATCACCGCGGTGCGCGACGAGGAAGGCGACCTGGTCAGCTTCGTCTGCTTCTTCAGCGACATCAGCGAGCG CAAGGCCAGCGAGCGGCGCATCCACCGCCTGGCCTACTACGACGCCCTCACCCACCTGCCCAACCGCACGCTGTTCCAGGACCGTCTGCATACCGCCCTG CAGCAGGCCGAGCGCAACGGCCAGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAGCCGATCAACGACTCCCTCGGCCACGCCGCCGGCGACC GCATGCTGCAGGAAGTGGCGACCCGCCTGAGCGCCTGCGTCAGCCAGGACGATACCGTGGCGCGCATGGGCGGCGACGAATTCACCCTGCTGCTGCCTTC CCAGGGCGACCGCGAGATCGCCCTGAAACGGGCGATCCAGGTCGCCGAGCTGATCCTCGGCCGTCTGGCCCGGCCGTTCACCCTGGAAGGCCGTGAATTC TTCGTCACCGCCAGCATCGGCGTGGCCTTGTCGCCCCAGGACGGCGCCGAACTGAGCCTGCTGATGAAGAACGCCGACACGGCGATGTACCACGCCAAGG AGATGGGCAAGAACAACTTCCAGTTCTACCAGGCCGAGATGAACGCTCGCGCCCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCGCGCCCTTGAACT GGGCGAGTTCGTCCTCCACTACCAGCCGCAGTTCACCGGCGACGGCCGCCGCCTGACTGGCGCCGAGGCCCTGCTGCGCTGGCAGCATCCGCGCCGCGGA CTGGTTCCGCCGAGCGAGTTCATTCCGGTGCTGGAGGAGATCGGCCTGGTGGCCCAGGTCGGCGACTGGCTGCTGGCGGAAGCCTGCAAGCAGTTGCGCA GCTGGCACAAGGCCAAGGTGCGGGTGCCGAAGGTCTCGGTGAACCTCTCGGCACGGCAGTTCGCCGATGGCCAGTTGGGCGAGCGGATCGCCGCGATCCT CTACGAGACAGGCATCCCGCCGGCCTGCCTGGAGCTGGAGCTGACCGAAAGCATCCTGATGAGTGACGTCGCCGAGGCCATGCAGATCCTCTCCGGGCTC AAGCGCCTCGGCCTGGCCATCGCGGTGGACGACTTCGGCACCGGCTACTCCTCGCTGAACTACCTCAAGCAGTTCCCCATCGACGTGTTGAAGATCGACC GCAGCTTCGTCGACGGCCTGCCCCACGGCGAACAGGACGCACAGATCGCCCGGGCGATCATTGCCATGGCCCACAGCCTGAACCTGATGGTGATCGCCGA GGGCGTGGAGAGCCAGGCCCAGCTGGACTTCCTTCGCGAGCACGGCTGCGACGAGGTGCAAGGCTACCTGTTCGGCCGGCCGATGCCCGCCGAGCAGTTC GGCATGCTCTACGCCAGCGACGTGCTGTTCATGTTCAACGAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCCGTGCGGCGCGCTTGAGCGCCGCTTATCCGCGACATGATGGCCTTTCATGTGCCAGCACCCGCCGCATGGGTTAGAATGCGCGCCTTTTCCCAGC ACCGATCCTTATGAGGACCGCCATGTTCAGCCGTGATTTGACCCTCGCCCGCTACGATGCCGAACTCTTTGCCGCGATGGAGCAGGAAGCCCAGCGCCAG GAAGAGCACATCGAGCTGATCGCCTCCGAGAACTACACCAGCCCGGCGGTGATGGAAGCCCAGGGTTCGGTGCTGACCAACAAGTACGCCGAAGGTTATC CGCACAAGCGCTACTACGGCGGCTGCGAGTACGTCGATATCGTCGAGCAACTGGCCATCGACCGCGCCAAGCAACTGTTCGGCGCCGATTACGCCAACGT CCAGCCGCACGCCGGCTCCCAGGCCAACGCCGCGGTCTACCTGGCCCTGCTGTCGGCCGGCGACACCATCCTCGGCATGAGCCTGGCCCATGGCGGCCAC
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| Amino Acid Sequence |
>diguanylate cyclase
MSTPSLTPSPPPAGDPLTVPDRPAAKAGLLLLVLLMLGLLLWQMSQELRQQERFEHERAAAQLDRLNDRLSLTLELKARTALALLPGVPPSERGEIQGRL LSRISDALPQVRQLQWVDSALQTDSPSPETTLPEQLRQHAGSGLYHYCLDPRDGESLYLTLREPGSRRDSGFWLLHLASDSLAQWSPDLPTGNLLWRLED QYAGRVLWHTPGSTALLDDMQTLGVEPLRNSDWQLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLRQAATALAA IDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDLEPGWLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQ GGQVWVLRDVTEEQHALGVLEETRRRYQDIFEGVGVALCVLDLSALRQALVEQGLDSCAALRAWLAGEPGRQQALLERIRITEINDVSRRLLQIDSTEQA WQRLLDHGPLQPDSLRLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVTLSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIH DLHARRVIFSNHHLGQQLGYNQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQAFSRDRSGRVARLIGVAK DITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRENPG QHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRL LTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTAL QQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLEGREF FVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRG LVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGL KRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQF GMLYASDVLFMFNEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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