Pseudomonas aeruginosa AZPAE12145, NQ06_RS18470
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCGAACGAGCCCCCGCCGGTATAGCAGTTGAACAGCGGCGGGAAGACCTTGAGCGGCAGGGCGGCGGACATGAACAGGGGATGGTTCCACAGGCGCTG CAGCATGGCTTCGCCGATCTCCCGGGCCAGCGGGTGGTCCTGCGGCAGTTGCAGGTTGTGCTTGGCCTTGGCCGATTGGTAGCCGGCGGTCGCCTTGCCG TCGGCCCATTCCGCCTGCTCCAGGGCTGCGCGGATCCGGGAGACTTCCTCGGCGGTGAAGATGGCGGGAATATGCAGCAACATGGCGCTGTCCATGAAGG CGAAATGATTGCCAATGATATTGATTTGCATTGGCCATGTAAAACCGCCAAATGTTCCAGACGAGCGAGATGGGAAAAAATGTAATGAGAAAATTGTAAA GAATGTAAATTCCTGTCGAATGCGAATCCGTAATAATTGATAACAATTCTGATCTGCAATAAATTCCGCGACCTTCACAGCTCCCGGGGAGGGGTTTCGA
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| DNA Sequence for Gene |
>NQ06_RS18470
ATGTCGCGTCAGTCCACGGATACCGCCGTTTCTTCGCAACGTCTGCTGGCTTCGGCCATCGGTGTGGCCATCACCGCCATCGCCGCACCGCAGGCAGCCC ACGCCGACGAGGCCGGGCAGAAAAAGACCGACAAGGACCGCGTACTGTCGCTGGATGCGGCCACCATCGTCGGCGAGCAGCAGGACGAAACCACCTACAA CGTCGACCGCTCGGCGTCGAAGAAGTACACCGCGCCGCTCTTGGATACGCCGCGCTCCGTCACGGTAGTACCAAAGCAGGTGATCAAGGATACCGCCGCC GTGTCTCTCCAGGATGCACTGCGTACCGTTCCAGGTATTACCTTTGGCGCGGGCGAGGGCGGCAATCCCACCGGTGACCGGCCATTCATTCGCGGCTTCG ATGCGCAAAGCGATACTTACGTCGATGGTGTACGCGATACTGGTGCACAGACCCGCGAGATCTTCAACCTTGAGCAGATCGAGGTCAGCAAGGGCCCTAA CTCGGCATTCGGAGGACGGGGCTCGGCCGGCGGCAGCCTCAATCTCGTCAGCAAGCAGGCCAAGGCTGGGAACTTCATCGATGGAGGCTTCACCTATGGT TCTGACCAGACTCGCCGCTACACCCTGGACCTCAACCAGGAATTCCTCGATGGCAATGCGGCATTCCGGCTGAATCTTCTCAAGCACGATGCCAATGTCG CGGGCCGCGATGAAGTCGATGTCAGTCGCTGGGGCGTAGCGCCGTCGCTCACCTTCGGTCTTGGCTCGCCGACCCGAGTGACCGTCAGCCATTATCACCT GGAAAGTGACGATACCCCGGATTCGGGCATTCCCTATGCCAAGAGTAGCGATCGCAGCAAGCACAATCCGGACAAACCGGTGAATGTCGATCGAGGCAAT TTCTATGGGCTGACGGGGCGCGATTTCCAGAAGAGCCGCATCGATACCAGTACCATCACCGTTGAGCATGATCTGACTGACAGCCTCACTATTCGCAATA CCTCGCGTTACGGCAACAGTCATCAGGACTATCTGTGGACACAACCGGATGACAGCCAGGGCAACATCAACAATGGCTCGGTCTGGCGCCGCCAGAACAA TCGGGTAAGTACCACCACCACAGCAGTCAACCAGACTGACCTGTTTGGAGAGTTCTACCTGGGTGGCTTCAAGAACAGCTTCAGCACCGGCCTGGAGTTC AGCCGAGAAGACAGCAAGCGCGATGGGTATACCGTCGATACCAATACCGGCCTGGGCAGCAACAAGTGCAATCCATCGCTGATCGGGGCGCCTAGCGGCT ATAACTGCACTAGTCTGGAAAATCCCAATCCGCACGATCCATGGAATGGCAGTATTACCCGGAAATATGCGCCGCTGAATACGGTCGGCACCACCAAGGC AATATATGCGTTCGACACCATCGACCTGAACGAGCAGTGGCAGGTCAATATTGGCGCGCGCTTCGATAGTTTCGAAACTACGGCGAAGAACCACGGTGTA AGACCCGCTACCAAACTCAGCGACAAGTCGAGCTTCTGGAACTGGCAGGCAGGCTTGGTGTGGAAGCCTGTACCCAACGGCAGCATCTATGCGTCCTACG CCACTTCGGCTACGCCGCCGGGTAGCATGCTCGATAATGGGGATACCTCGAATGCTGTCGACGGGTTCGCCATCAGCAACAACCTTGAGCCGGAAGAAAC CACGAACTACGAGCTTGGTACCAAGTGGGCTTTCTTCAACGAGCGGCTGGAGCTGAGTGCCGCGATCTTCCGCACCGACAAGGACAATACCCGCATCCTG GTCGCCAACCAGACCTACGACAACGCCGGACAATCCCGCGTCGACGGCGTGGAGTTGAGCGCCAGTGGCAAGCTGACCGAGAAGTGGAAGGTGTTCGCGG GCTACAGCTACCTGGACAGCGAGTTGGTCGATGCCGGTAAGGCTGGGCGTAACGGCAATGTGAACGCATCGGCGGCTTCCAACAACGGCAACGAGATGCC AAATACGCCGAAGAACAGCTTCAGTCTCTGGACCACCTATGACATCTTCCCGAAGACCACCATCGGCGGCGGGGCTTTCTATGTCGACAAGGTCTATGGC GACGTTGGCAATACCGTCTATGTCCCCGATTACTGGCGCTATGACGCAATGGCCAGCTACAAACTGAGCAAGAACGTCGATTTCCAGTTGAACGTGCAGA ATGTGTTCGACAAGAAGTACTTCGACAAAGCCTATGCGGCGCACTATGCGTCCCAGGCCGCTGGAAGGACGATACTGTTCAGCACCAACTTCCACTTCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCCGCTCTCGCTCCCCACGAAAGCCCCATTCCCTCTACGGGATGGGGCTTTCCCGCATCCAGGTGGGTAAATAGAGCGTAAAGAACGTTAATTCGGCT TTATCGCAACTGATTATCAAATAGAATTGCCCGCCGACGTCCTCGTGTCGTCTGGCCGGCGCTTGGCGTCGGCGTAGTCCCGTTGTTGCCGCGCGGCGGC CGTGAAGGTGATCCTGTGAAGAAAGTCTGGTTCCAGTTGCATTGGTTCTTCGGTATCAGCGCCGGCCTGGTGCTGGCGCTGATGGGCGTCACCGGAGCGA CCCTGTCGTTCCAAGACGAGCTGATGCGCGCGCTCAACCCTGACGTGCTGGTGGTGCAGAAGCGCTCCGAGGGTGTGCTGCCGCTGGACGAACTGGTGCG CCGTATCGAAGGTGCCGAGCCGGGGCGGAAAGTGGCCTTCGTCTGGGTCGAGATGGACAGCGACAAGGCCGGGCGGATCTTCTATACCCCGCCGCCGGGA
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| Amino Acid Sequence |
>TonB-denpendent receptor
MSRQSTDTAVSSQRLLASAIGVAITAIAAPQAAHADEAGQKKTDKDRVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPRSVTVVPKQVIKDTAA VSLQDALRTVPGITFGAGEGGNPTGDRPFIRGFDAQSDTYVDGVRDTGAQTREIFNLEQIEVSKGPNSAFGGRGSAGGSLNLVSKQAKAGNFIDGGFTYG SDQTRRYTLDLNQEFLDGNAAFRLNLLKHDANVAGRDEVDVSRWGVAPSLTFGLGSPTRVTVSHYHLESDDTPDSGIPYAKSSDRSKHNPDKPVNVDRGN FYGLTGRDFQKSRIDTSTITVEHDLTDSLTIRNTSRYGNSHQDYLWTQPDDSQGNINNGSVWRRQNNRVSTTTTAVNQTDLFGEFYLGGFKNSFSTGLEF SREDSKRDGYTVDTNTGLGSNKCNPSLIGAPSGYNCTSLENPNPHDPWNGSITRKYAPLNTVGTTKAIYAFDTIDLNEQWQVNIGARFDSFETTAKNHGV RPATKLSDKSSFWNWQAGLVWKPVPNGSIYASYATSATPPGSMLDNGDTSNAVDGFAISNNLEPEETTNYELGTKWAFFNERLELSAAIFRTDKDNTRIL VANQTYDNAGQSRVDGVELSASGKLTEKWKVFAGYSYLDSELVDAGKAGRNGNVNASAASNNGNEMPNTPKNSFSLWTTYDIFPKTTIGGGAFYVDKVYG DVGNTVYVPDYWRYDAMASYKLSKNVDFQLNVQNVFDKKYFDKAYAAHYASQAAGRTILFSTNFHF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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