Pseudomonas aeruginosa DK2, PADK2_11095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00909
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other DK2 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdk02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 88 101 8.5E-65
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 39 328 6.0E-33
CDD cd13659 PBP2_PotF - - 26 356 0.0
Gene3D G3DSA:3.40.190.10 - - - 130 357 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 152 166 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 212 231 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 45 66 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 29 45 8.5E-65
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 26 362 3.67E-97
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 8 359 1.5E-84
Gene3D G3DSA:3.40.190.10 - - - 26 329 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 121 137 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 262 281 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 307 333 8.5E-65
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 175 194 8.5E-65
PIRSF PIRSF019574 Periplasmic_polyamine_BP IPR001188 Spermidine/putrescine-binding periplasmic protein 1 363 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 72 86 8.5E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.