Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCTAAACAGCCTTCTTGAGCGAGTCGACGGCTTCGTGCAGAACATGCTCGCTACGGTTGCTGGAGTCGAGAGATTGAGAAAGGGGAAGCACCCTGTGGG GAGCCTTCCGGGAGAGGAGTACTTGGTTGCGGGAAGCAACAAGGGACAGCGCGCCTACACATTCATGTGGGAGGTTCAAGGCAAGGAGGAATCGCTAACC GAGCCCAATCTTACTGCGGGACTGGCGGTACTGGAACGCAGCAATGAAAACGGTAAACCACCGCCCCCTGCCTTCAAATCGGACAAAGAGGCTTTGGAAT TGTGGGACGCCATTGTCGATTCGATCCGCGTGCGCCCGACGTCTTCATCGCCGCGTGGCGGAAATGCCGGTCCTTCCCCTGCTCCGAAACCCGCTACGCC TGGCGGCCAAACGCTGGGTGATCACTATGTCTACGAGGAATTCCTCTCCAGCCTGAAGCCAAAAGACAGCTGGCTGGACGACCTATAGGAGCAACCCGCG
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DNA Sequence for Gene |
>NQ06_RS03925
ATGGACATCATTCGCCTTGGCGACACCACCAGCCATGGAGGCACGGTGATTGAGGCGTTCGGCCAGACCGACCTCAACGGCAAGCCGATGGCCGGTGTAG GCCACCAAGTGGTTTGCCCCTTGTGCAAGGGAACCTTCCCCATTACCGAAGGTAGCGCCCTGCTGGATGTGAATGGGGTCCCGGTCGCGCTACATGGGAT GAAAACAGCTTGTGGTGCCAGCCTGATTGCCAGTGGCCCGTTGGGCGCTGCCGAAAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAAGGGGGACGTTCGATATGCCGAACGACTTCGGCGACCTCCTTCGTGCCTCTCCTGTAGAACGCTCAGGAAAACTCCGCCGGCTTCTTGCCCAGCATG ACCTGCCCCGAGCCTTGGCACCTTGGCCAGTCTGCCGTTGTGCACTTCAGCAAGCGCTGGCGGCATTCTCTTTGCTCGTTGAGCGTCTCCATTGCCGCCA GGATCTACTGGCGCTCAGATAGCCGGTTGCTCTCGCGCACGTCGCTGCTTGTAGTCGCCAATGCAAGCAGGCGTTCCGCAAAGACCCATGGCTGATCCCG GGCGACAGGGTTCAAGGCCTTGCTGCACCGGGCTTGCGCTCACTGAGGTAGGGGTCGCTGAAAACTCCCAGCGGCTAGAGCACGTCGGCTATCCGACCAA TGTCGTACACCGCCGGGCGTCCCGGGGGTAGCCGGCGCCAGTTCTATGGATACAGTGGAAGCAGCTCTGGAAAGCCTGTAGTAGACCGATTGGTCAACTA
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Amino Acid Sequence |
>hypothetical protein
MDIIRLGDTTSHGGTVIEAFGQTDLNGKPMAGVGHQVVCPLCKGTFPITEGSALLDVNGVPVALHGMKTACGASLIASGPLGAAES
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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