Strain | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGAGCCCTTCGAGTGCCTGCTGTTCGACGTCGCCGGGCTGACCCTGGCGGTGCCGCTGGTGTGCCTCGGCTCGATCTATCCGCTGGAGAACCAGGAACT GACCCCGTTGTTCGGCCAGCCCGACTGGTTCCTCGGCATCCTGCCGTCGCAGGCGGGCAACCTGAAGGTGCTGGACACCGCACGCTGGGTGATGCCCGAA CGCTACCGCGACGACTATCGCGACGGCCTCAAGTACGTGATCTCGGTCCAGGGCTACGAGTGGGGGCTGGCGGTGCACCAGGTGAGCCGCTCGATCCGCC TCGACCCGGCCGAGGTGAAATGGCGCAGCCAGCGTAGCCAGCGGCCCTGGCTGGCCGGCACGGTCATCGAACACATGTGTGCGCTGCTGGATGTGGCGGC GCTCGCCGAACTGATCGCCAGCGGCGCCGTCAAGCGCCTGCACGGCGACCATTGATAGACAGCTTCCGCCGCTTGCGGCGGTTTTCGAGAGGTTAGGGGA
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DNA Sequence for Gene |
>NQ06_RS03695
ATGAGCAAAGCCACCGCGCAAAGCGCCGAAGATCCGATCCTGCAGTGGGTCACCTTCCGCCTGGACAACGAGAGCTACGGCATCAACGTGATGCAGGTCC AGGAGGTGCTGCGCTACACCGAGATCGCCCCGGTGCCGGGCGCGCCGAGCTACGTGCTGGGCATCATCAACCTGCGCGGCAACGTGGTCACGGTGATCGA CACCCGGCAGCGCTTCGGCCTGGACCCTGCGCCGGTCAGCGACAACACGCGGATCGTCATCATCGAGGCGGACAAGCAGGTGGTCGGCATCCTGGTCGAC AGCGTCGCCGAGGTGGTCTACCTGAAGCAGTCGGAAATCGAGACCGCGCCGAACGTCGGTAACGAAGAATCGGCCAAGTTCATCCAGGGTGTCTGCAACA AGAACGGCGAGCTGCTGATCCTGGTCGAGCTGGACAAGATGATGACCGAGGAAGAATGGTCGGAGCTGGGCAGCATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGTTCGACCGACACGAGGGCCTGCTGAGATGGAGGTCGTCGCGCTGGCACTGGCGGTCGCCGCCTGCCTCGGACTGGCGGCGGCGTGCCTGTGGCTGC GCCGTGAATTGCGCCGCCTGCAAGCTGCGCTAGCGCAGCAGGCGGAGGAGGGCGCGGCGCGCGAGCGCCGGCTCAAGGAACTGAGCAAGCGCATCGAGTC CTACCAGCAGGTCAACGTGCGCATGGGCGAGGCCTTGCAGGACCTGGGCAAGCAACTCGCGCCGCTTCCCGACCGGGTCGCGCGCCTGGAGCAGCGCGAT CCGACCACGCTGTCGTTCAGCCAGGCCGCACGCCTGGTCGGGCTCGGCGCCAGCGCCGAAGACCTGACCCAGGCCTGCGGGCTGTCGCAGGCCGAGGCCG AGCTGGTGGCGCGCCTGCACGAAGCCAAGGGCAAGTGACGGCCATCGACCCGGCGCTGGCGCTTTTCAGGCGAGCAGGCGGCTCGCCACTTCTGCCAGTG
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Amino Acid Sequence |
>chemotaxis protein CheW
MSKATAQSAEDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRFGLDPAPVSDNTRIVIIEADKQVVGILVD SVAEVVYLKQSEIETAPNVGNEESAKFIQGVCNKNGELLILVELDKMMTEEEWSELGSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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