Pseudomonas aeruginosa AZPAE12146, NQ07_RS11765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTTTTCGCGCAGTTCTTTCTGCGCGGCGCGGAATTCGGCGTTGTACTGCCAGGAGCGTTCGCTGCCGTCCTGGGCCTGGGCAGTAGCGGCGCCGGTC GCCAGCAGGGCGGCCAGCAGCATCGGGATGATCTTCATGGCAAACCTCTCGGGTTGGCTCGTCGCCGGGGCGAGGTATTCGTCCCGTTTGAGCAAAGAGT AAGAGCGGACGGATTACCCGAGGGTGAGTGGAAAATTACGTTTCCGATAACTTCGGCGATGCTCCGTTGCATGGCGGAGGAGTCTGCGCGAAGCGCATTA AGTGCGAGTTAAGATTGCGGAAAAGTAATCCCCGCCTCATGTCTGCGTCATTTCCCCGGTTCCAGAATCAGCCCCACGGTCAATGCCGGTTACGGCAGGA CTGCGCGGGGGCGCGATCGACCAGAAGTTCACGCACAGCCAGCGCCGCAAGGCATGGCCGCAGAAGAAAAACAGACATGAACCGATCTGGAGCAATCGCC
DNA Sequence for Gene
>NQ07_RS11765
ATGCAAGGGGATGGAAAGAAACGACTGTGGACGCTTCCACTGCTGCTGGGCGCCGGACTGATGGCCTCGGCCGTCGCCGAGGAGAACGCCGAGCGGAGCA AGGAAGGTTTCATCGAGGGCAGCGAGGTCAACCTGCTGCTGCGCAACTTCTACTTCAACCGCGACTTCCGCAAGGGCCAATCGAGCCCGGCGGGCGGCGG CTACACCGAGGAGTGGGTGCAGGGCTTCATGGCCAACTTTTCCTCGGGCTTCACCCAGGGCACGCTGGGCGTCGGCATCGACGCCTTCGCCCAGCTCGGC GTGCGCCTGGACAGCGGCGGCGGGCGTTCCGGCGCCGGCGGTAGCGTCGACCTGCTGCCCTATGACGACCAGGGGCGGCCGCAGGACGACTATTCGCGAG CCGGCGGCGCGGTCAAGCTGCGCTGGTACGGCACCGTGCTGCGGGTCGGCGACGTGTTCCCGGAAACCCCGGTGATCCAGTACGGCAACAGCCGGCTGTT CCCCTCCAGCTTCCGTGGCTTCACCCTGGTCAACGACAGCCTGGCGAAGGGCCTGACCCTGCAGGCCGGCAAGCTGAACTCGATGACCCAGCCGAACAGC ACCAGCGGCAGCGACGACTTCTACAGCTTCTACACCGGCCGGCGCATCGACTCGCCGTGGGTCGCCTACGCCGGCGGCGACTACCAGGCCACCGAGCACT GGAGCGTCAGCCTCTACGGCAGCCGCCAGAAGGACGCCTGGGACCAGTACTACGCCGGCACCAGCTTCAACTATCCGCTGGACGACAAGCTGTCCCTGCT CGGCGGCGCCAACTACTACAAGGTCAAGGACCAGGGCAGGCAGGTGATGGGCGAACTCGACAACGACATCTGGAGCGTGCGCGGCGGCTTCGCCTACGGT CCGCACCAGGTGCTGCTGTCGTACCAGCGCAACAACGGCGACGACGACTTCGACTACCTGCGCCAGACCGACTCCATCTACCTGGACAACTCGATCCAGT ACAGCGACTTCAACTCGCCCAAGGAACGCTCGCTGATGCTCCGCTACGACCTCGACATGGCCGCCTTCGGCGTGCCGGGGCTGAGCTTCATGACCCGCTA TGGCAAGGGCTGGGACGCCGATTATTCGAATGCCAACAGCGTCTACATGCGCACCGACGCCAACGGCAACCCGCTGACCAACCAGGGCCGCTGGGAACGC GACGTGGAGGTCAAGTACGTGGTGCAGGGTGGCGCGGCCAAGGACCTGGCGTTCCGCGTGCGCCAGGCCACCGTGCGCTCCGATAGCTTCGAGTCGGACC TCGACGAAGTCCGCCTGATCGTCGAATACCCGCTGCAAGTCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCGCGCCGCCGCCCCGTCCGGGGCGGCGCTCTGCGACAGCCCGTTGCTGGCGGCTGCGCGGCGGCGCTGCTACTTTCCTCTGGGTAGGCGGGCCGAAG GGCGGTTCCTGGCCGGGCATGGCTTCGACCTGCCGGTGGGCGCCGCGACCCGAACCTCGGCCACGCCATTCCACCCATGCCGCTCGGGCACCGGCGTGCC CGTGGCAGCCCAGGCTACGGGCGCCGCGTAGCCAGCCAAGCGGGAGTCGACATGGCCTCGTGGACCTTGGTGGACGCCAGTGCGATCGCTGTCCGCCATC CCTACACCTTCTACAAACCGGACGCGGAGACCATCGACCGGGTCGCCGCCGGGGAAAGCGTCAAGCTGATCTTCGCCTTCGATACCGACAACCCCGATGC GCCGCGCGCCGAGCGGCTCTGGGTGACGGTCGAGGGCATCGAGGCGGATGGCGCCTTCAGCGGCCGCCTGGACAACTATCCGCAATACATCCGCGACCTG
Amino Acid Sequence
>porin
MQGDGKKRLWTLPLLLGAGLMASAVAEENAERSKEGFIEGSEVNLLLRNFYFNRDFRKGQSSPAGGGYTEEWVQGFMANFSSGFTQGTLGVGIDAFAQLG VRLDSGGGRSGAGGSVDLLPYDDQGRPQDDYSRAGGAVKLRWYGTVLRVGDVFPETPVIQYGNSRLFPSSFRGFTLVNDSLAKGLTLQAGKLNSMTQPNS TSGSDDFYSFYTGRRIDSPWVAYAGGDYQATEHWSVSLYGSRQKDAWDQYYAGTSFNYPLDDKLSLLGGANYYKVKDQGRQVMGELDNDIWSVRGGFAYG PHQVLLSYQRNNGDDDFDYLRQTDSIYLDNSIQYSDFNSPKERSLMLRYDLDMAAFGVPGLSFMTRYGKGWDADYSNANSVYMRTDANGNPLTNQGRWER DVEVKYVVQGGAAKDLAFRVRQATVRSDSFESDLDEVRLIVEYPLQVL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site