Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCCCTGCAAAGGCAGGCCGAGGAGCAGCAGGCGCTCTTCCGCGGCCCACGGCGCCAATAGCGGAAAATCGGCGGGAGGCGCATGCACCACGACCTGCAA GCGGGAGTCGAGACGCCAGAACCGCTCGAGAACGGGAATATCCGCGCCTACCGACGACATCCCGAGAAACACCACGGCATACGGCGCATCGGCCTGGAGG GCCGAGCGTATCCGCCCCAAGGCCTCCTCGGCGCTTCCCGCCGTATCCACCTGGTAGCCCCGCTCAGGCGCCACGGGAGGCGATTCGGCCTCTAGGGTTC CCTGCAACAACCCGCATACACGGTCTCGATCCGCCTGCCGCTCATCGATCACCAGCAAGCGCCGGTTCCTGATGGGTAACGCCTCCATGATCCGCACCTC CGCTCGCCCTGTCGCCGCGTGCATGCCCCTCGTCCAGGCCAGACTCGGACTATGCTTGCCTGAAGCACTCAGGCAAAACTCACCCGGTGGACAGACACTC
|
|
DNA Sequence for Gene |
>NQ07_RS11420
ATGAACGATAGCGCACCTCCTTCCAACGAGACGGAGATCCGCTTCAGCGTACTGCTGGTCGACGACGAGCCGCTGATCCTCAGCAGCCTGCGCCGGCTGC TACGCAACCAGCCCTACGACCTGTTGCTGGCGGAGAGCGGCGAACAGGCCCTGCAACTGCTGGAAAGCCGGCCCGTGGACCTGGTGGTGTCCGACGCCCG CATGCCGAACATGGACGGCGCTGCCCTGCTCGCGGAAATCCATCGCCGCTCCCCGGAAACCATTCGCATCCTGCTCACCGGCCATGCCGACCTGCCAACC ATCGCCAAGGCCATCAATGAAGGGCGCATCCACCATTACCTGAGCAAGCCGTGGAACGACGACGAGTTGCTGCTGACCCTGCGCCAGTCGCTCGAATACC TGCATTCCGAGCGCGAGCGGCGGCGCCTGGAGCGACTTACCCAGGAGCAGAACGACCGCCTCCAGCAACTCAACGCCACGCTGGAAAAGCGCGTTCAGGC GCGCACCGCCGAACTGCAGCAGACCGCCGACATGCTCGACCTCGCCTATGAGGAGCTAAAGCGCAGCTACGTGGTCGGCACCGAGGTCTTCTCGCTGCTG GTCAACCAGCGCCTGCCCAAGGACAAGCAGACCAACCAGCAAATCATCGAACTGGTCCGCGCCTGCTGTGCCAGCGGCCTCGTCGACGAATCGGATGGTC GCGACCTGGCGATGGCCGCGGCGCTCTACAACATCGGCAAGCTGAGCTGGAACGACACCCTGCTCAGCTCGCCCTCGGACCTGCTCTATCACCACGACCG CGATCGTTTCCGCGGCTACCCGGAGCTCAGCGAGTCGCTGCTGATGTCGCTGGAACCGATGCAGGACGCCGCCCGCCTGATTCGCCATCACCAGGAGCAC TGGGACGGCAGCGGCTATCCGGACCACCTCAAGGGCGAGGCCATTCCCCTGGGCTCGCGCCTCTTGAAGCTGGCGGTGGATTTCGTCGAGCTGCAGCGCG GACTGATCCTCGAACGGCGCATGAATCGCGACGAAGCACTGATGTACATCCGCAAATACGCCGGCCGGCTGTACGACCCCGAGCTGATCGAACCGTTCAT CCAGGTCTGCGCGACGACCCTTGCCGATGTCACCCTGGCCGATCCGCAAGTCCGTGCCCATGGCACCCGCGACCTGGTTCCGGGCATGGTGCTGGCGCGC AACCTCACCGCCAACAACGGCATGCTGCTGCTCAACGCGGGCAAGGTCCTGAACCTGGCGCTGATCGAGAAGCTGATCGCCTTCGAAGCGATCGAAGGCG CACGCTACACGCTGTTCGTGCGCCTCCCGGAGTCGACGACCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGGCTCCCGTCAGATCTTGAAGCGCTCCACCGACGAGCGCATGGTCGCTGCAACCTCGTTCAGGCGCCTGGCGGTGGCGGCCATCTCGTGCATCGCCTG GGTGTTCTGCTGCGAACGCTGGGCGATGAGTTCCACGCGCTGGGCGATTTCATCACTGGCGCGCGACTGCTCGCGGATGGTCTGGGAAATCTCATCGACC ACCGACGCGGCATGACGGGTTCCATCGAGGATCTCATTGATCGACACCCCTGCCTGGCGGGCGAACGACACCCCCTCGTTGACCCGGCTCACGCCGGCCT CCATGCTGTTGATCGCTTGCCCCGTGCTGGCGCGGATGCGCTCGATCATCGCGGTGATCTCCTGGGTCGACTGGGTGGTCCGCGCCGCCAGCCCGCGCAC CTCGTCGGCGACCACGGCGAAACCGCGCCCGGCGTCTCCGGCCCGCGCCGCCTCGATGGCGGCGTTCAACGCCAGCAGGTTGGTCTGCTCGGCGATCCCC
|
|
Amino Acid Sequence |
>chemotaxis protein CheY
MNDSAPPSNETEIRFSVLLVDDEPLILSSLRRLLRNQPYDLLLAESGEQALQLLESRPVDLVVSDARMPNMDGAALLAEIHRRSPETIRILLTGHADLPT IAKAINEGRIHHYLSKPWNDDELLLTLRQSLEYLHSERERRRLERLTQEQNDRLQQLNATLEKRVQARTAELQQTADMLDLAYEELKRSYVVGTEVFSLL VNQRLPKDKQTNQQIIELVRACCASGLVDESDGRDLAMAAALYNIGKLSWNDTLLSSPSDLLYHHDRDRFRGYPELSESLLMSLEPMQDAARLIRHHQEH WDGSGYPDHLKGEAIPLGSRLLKLAVDFVELQRGLILERRMNRDEALMYIRKYAGRLYDPELIEPFIQVCATTLADVTLADPQVRAHGTRDLVPGMVLAR NLTANNGMLLLNAGKVLNLALIEKLIAFEAIEGARYTLFVRLPESTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|