Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGACAGGGGAAGCAGGAGCAGCAGTACGAGCAGCAGGCGGCGCATGAGAACGATCCGGAGCCGGGTGAAAAGGCGGCTATTATAGGCGCGACCGTTTCC CCTGAGCCGCCGACATGCCCACCGCCAAGCCCGAAATCGTCATCACCTATTGCACCCAGTGCCAGTGGCTACTGCGTGCCGCCTGGCTGGCCCAGGAACT GCTCAGCACCTTCGCCGACGATCTCGGAAAAGTCTGCCTGGAGCCCGGAACCGGTGGCGTCTTCCGTATCACCTGCGACGGCGTGCAGGTCTGGGAACGC AAGGCCGACGGCGGCTTCCCCGAGGCCAAGGCGCTCAAACAGCGGGTTCGCGACCGCATCGACCCGCAACGCGACCTCGGGCACAACGATCGTCCTTCCC GCTGAACCGCTGCCGTCCGCCCATGGCTTGTTGCAGGTCAACGGGCGGCGCGGCGCATAGGCATAGCCTGGGGGCATTCATCCTGTCGAAGGGAGTGCCC
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DNA Sequence for Gene |
>NQ07_RS06130
ATGAGCATCATCGTCACCGGCGCCGCCGGCTTCATCGGCAGCAATCTGCTGCAGGCACTGAACCGGCGCGGCGAGACCGACATCATCGCGGTGGACGATC TCACCGACGGCGAGCAGTTCCGCAACCTGGCGGACGCCGATATCGCCGACTACCTGGACCAGAACGACTTCCTCGAGCGTTACGCCCGCGGCGACTTCGG CACGGTCCGCGCGCTGTTCCACCAGGGTGCCTGCGCCAGCACCCTGGAAAGCAATGGCCGCTACATGATGGAGAACAACTACCGCTACAGTTGCCGCCTG CTGGAAAGCAGCCTGGAACTCGGCGTGCCGTTCCTCTACGCCTCGTCGGCGGCGGTCTACGGAGCCGGCCGGACCTTCCGCGAGGCGCGCCAGTACGAGC GGCCGCTGAACGTCTACGGCTATTCCAAGTTCCTCTTCGACCAGCGTGTGCGGCGGGCGCTGCCGCAGGCGCGCAGCCAGGTGGTCGGCCTGCGTTACTT CAACGTCTACGGGCCGCGCGAGGAACACAAGGGGCGGATGGCCTCGGTGGCCTACCACTGCTACCAGCAATTGCGCCGCGATGGGCGGGTCGAACTGTTC GGCGAACACGGCGGCTTCCCGCCCGGCGGCCACCTGCGCGACTTCGTCGCGGTGGAGGACGTGGCGCGGGTCAACCTGCATTTCTTCGATCATCCGCAGC GTTCGGGAATCTTCAACCTCGGCAGCGGCCAGGCGCGGACCTTCAACGAGGTCGCCCTGGCGGTGATCAATAGCGTCCGCGCCAACGCCGACCAGCCGCC CCTGTCGCTGCAGCAGGCGGTGGAAAGCGGCCTGCTCGGCTACCGCGAGTTCCCCGAGTCGCTGCGGGCGCGCTACCAGAGCCACACCTGCGCCGACCTG GAGCTGCTGCGCGAGGCGGGCTACCGCGACGATTTCCAGAGCCTGGAAGAGGGCGTCGCCGGCTACTGCCGCTGGCTGGCGCGCAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGATCTCGCTCAGCGGCCCAGCGCCCCGCCCACCGGGGCGCGGGCGAAGCGCAGCTCCGGCAGCAGGGTCAGCAGCGCCAGCACCCCGAGGGCCGCGCC GACCCAGAGCGCGCCCTGCAGGCCGAATCCGCCGGCGATGCCCAGGCCGCCGATCCAGGAACCGGCCATCACGCCGAGCATGATGCAGGCGGTGTGCACC GAGTTGACCAGCATGTTGTTATGGCCGACCCGTGCGCCGCGAGTCACCAGCGCCGGGTTCATCGACACCCCGGTCAGGCCGATCACCACCAGCGCCGCCA CCGCCACCGCCGGAACCTGTCCGAACAGGGCGAAGGCCACCATCGCGGCGATGGCTGCCAGCAGGCCGAAGGCCAGGACCGCGATGGTATGGCGGTCGGC CAGGCGGCCGACGATGTTGTTGCCCACCAGCGTCGCCAGGCCGTAGACCACCAGCAGCAGCGGTACGGTCGAGGCGGAGAAGCCGCTGACCTCGGTGAGG
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Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELF GEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL ELLREAGYRDDFQSLEEGVAGYCRWLARSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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