Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_35, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGCGCCGGGCAGATGCGCTGAACGCACTGCTGCTCGGCGAGTCCGAGGCCCGTCACCTGGGCTTCGACGTCGAGCGATTGAAGGCCGAACTGGTGCTT TGCACTGCCCTCGGCGTTGGCGCCGCAGTGGCGGCGGCGGGGATGATCGGCTTCATCGGCCTGGTGGTGCCGCACCTGATCCGTCTGGTTGCCGGTCCGG ATCATCGGACGTTGCTGCCGGCCTCGATGATGGCCGGCGCCATTCTCCTGCTGATTGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCCATTCTCCTGCTGATTGCCGACCTGCTGGCGCGCCTGGCGCTGGCTCCGGCGGAGTTGCCGATCGGCATCGTCACGGCACTGATCGG CGCGCCGTTCTTCCTTTATCTGCTATTGCGGGGGCGGGCCTG
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DNA Sequence for Gene |
>NQ07_RS28465
ATGCTGCGCGTGGAGAACCTGTCCATCCGCCGTGGCGGAAAGACTGTACTGGAAGGCCTCGAGCTGGAGCTGCGGCCTGGCGAGATGCTCGGCGTACTCG GCCCTAACGGCGCTGGCAAGAGCACCTTGCTTGGCGCTCTCTGTGGCGAACTGGAGCCGGCCGAAGGGCAGGTGCTGCTCGACGAGCGCGGTCTCGACGA CTGGCCGGGCGTCGCTCGCGCGCAGCGCCTGGCGGTGCTGCCGCAGAGTTCGTCGCTGGGCTTCGCCTTTCCGGTGGAGGCGGTGGTCGGCTTCGGTCGG CTGCCCCATTCCAGCGGCCGCGAGCGCGATGTGCAGATCGTCGCCGAGGCCTTGGCGGCGGCCGACGCCAGCCATCTGGCCGGGCGCAGCTACCTGGCGC TGTCCGGCGGCGAACGCCAGCGCGTGCACCTGGCGCGGGTGTTGGCGCAGCTGTGGCCGGGCGAGCCGGGGCAGGTGCTGCTGCTCGATGAACCGACCTC GGCGCTCGACCCGCTGCACCAGCACACTACCCTGCAGGCGGTGCATGATTTCGCCCGCCGCGGTGCCTCGGTGCTGGTGATCCTCCACGATCTCAACCTG GCCGCGCGCTATTGCGACCGCCTGCTGCTGTTGCAGAATGGTCGCCCGCACCTGCTCGGTACGCCCGAGGAAGTCCTGCGCCCCGAGCCGTTGCGCGCGG TGTTCGGCCTCGAGGTCCTGGTCCAGCGTCATCCCGAGCGAGGTCATCCGCTGATCGTCGCCCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAGTCGCCATGCGCATTCGCCTGTTCGCTTTCTGTCTGCTGCTGGGCGGCTGCCAGTCCCAACTGCCGCCGCTGCCTGATTGGCAGANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCGGCGTGACGCTGAGCCCGCAGCAACTGGTCGCACGCCTGGCGGCCGCGCC GCGAGTGATCGTCGGCGAGAAGCACGACAATCCCGATCATCATGCCGTGGAGCTGTGGCTGGCGCAGGCCCTGGGCGAATACCGGGCGCAGGGCAGCCTG CTGCTGGAAATGCTCGATCCCGGCCAGCAACCACGGGTGGATGCGGTCCGCGCACAACTCGGGAACGGCAAGCCGGTGGCGAACCTGGAGGAGGCCCTGG ACTGGCAGAAAGGTTGGGACTGGACGCAGTACGGACCCCTGGTGTCCTGGGCGGTTGCGCAACCCGCGCCGTTGCTGGCGGCGAACCTCCAGCGGAGCGA
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Amino Acid Sequence |
>hemin ABC transporter ATP-binding protein
MLRVENLSIRRGGKTVLEGLELELRPGEMLGVLGPNGAGKSTLLGALCGELEPAEGQVLLDERGLDDWPGVARAQRLAVLPQSSSLGFAFPVEAVVGFGR LPHSSGRERDVQIVAEALAAADASHLAGRSYLALSGGERQRVHLARVLAQLWPGEPGQVLLLDEPTSALDPLHQHTTLQAVHDFARRGASVLVILHDLNL AARYCDRLLLLQNGRPHLLGTPEEVLRPEPLRAVFGLEVLVQRHPERGHPLIVAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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