Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_26, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGCATCGCGCATACCCTGAACCTGACCTTCGACAACCCGGCCTTTGTCCCCCAGGCACTGGAGTCCAGCCTGGCGGTGTCCAGCACCTCGGCCTGCAAC TCGGCGCGGCCGGCGCCGTCCCACGTGCTTCTCGCCCTCGGCCACGATGCCGCCAGCGCTGGCCGCAGCGTGCGCCTGAGCCTCGGTCGCTACACCCGCG AGGCCGACGTCGACGCGGCGGTGGCCGCCCTCAAGGCCGCGGCGGATAGTGGCGCGCCGGCGTGGCAGCCGTTCCTCGGGGTATCCAGGGCAGGCTGAGC GGCCGGCTCGACCCGCCCTCGCCGAAGCCAGGGGCTGCGGATAACCGCGAAGCGGTTATTCGCCCTGCGGCTCCAGGGGCTTTTCGTCTTTGCCGCCATT TCCCGGCAATGTGCGCTTGGCGGATCATCCAGGTTGGGTATCATGCGTCGCCATTCCCATCCACCGCCGACGGAAGTCAGGCTTTGCCTGCGTGAGCCCA
|
|
DNA Sequence for Gene |
>NQ07_RS25625
ATGGACGATCTCTCCCCCGATTCCGCCTTGCCGCCTGCCGGCAGCGCCCAGGACAACGACGCGCCGCGCCAGTTGGTGGTCTGCATCGACGGAACCTCGA ACCGCTTCGGCGACCAGCCGACCAACGTGGTACGCCTGTACCGCTCGCTGTCGCGCGATCCGCGCAGGGTGCTGGCCTACTACGACCAGGGCGTCGGCAC CTTCGGCCTGAAGGAAACCCTGTTCGAGTGGCAGAAGTTTCCCTCGCGGATCGCCGGCCTGGCCTTCGGCTGGGGGCTCAAGCGCAACGTCGAGGGCGCC TATCGCTTCCTCGCCGAGCACTACCGGCCCGGCGACCAGATATTCCTCTTCGGCTTTTCCCGCGGGGCCTACGCGGTGCGCGTGCTGGCCGCGATGCTGC GCGCGGTGGGCCTGATCGATGCGCACCAGCCGCACCTCTTCGACTACGCCTGGACCCTGCTCACCACCCGCATGCCGCCCCGCGACGAAGACAAGCGGGC CGGCACGCGTCGCCGCGGACCGGACTTCGGCCTGCTGGGACGCTTCCGCAAGGTCTTCGGCCGGCAGGTGAAGGTGCACTTCCTCGGCCTGTTCGACACC GTGACCTCGGTGGGCTGGGTCTACGACCCGCTGACCGTGCCGTATTCCTCGAACAACGAAATGGTCGACGTGGTCCGCCAGGCCCTGGCCATCGACGAAT GCCGCTGCTTCTTCCGGCAGAACCTCTGGTTCGGCGAGAAGGACCGCAAGTCCGACGTGTTGCAGGTGTGGTTCCCCGGCATGCACTCCGATGTCGGCGG TGGCTATGCGCCGAAGGACTCGCGGCTGGCTCTGGTGGCCTTTACCTGGATGCTCGGCGAGGCGCTGGAGGCCGGCCTGCATGTCGACCCGGCGCGCAGC CGCGACCAGTTGCGCGCACGTTCGAAGCAGGGCCCGGACCCGACCGCGCCGATCCTGCCGGTGATGACCCGGCCCTGGCGCCTGGCCGAGTGGCTGCCGC TGCTGGTCTGGGACCGCCGCAGCGGCAACCGCGCCTGGCGCTGGTCGCGTGGCCGGCCGCGCTCGCGGCCGCTGGAACCGGTCGGGCAGGAAACCCGGGT CAAGCTGCACCGTTCGGTGCAGCGGCGGCTGGACGAATGCCCCGACTACCGGCCGTGCAACCTGCCAGCGCTGGAACGCTGCGACCTCATCGACGACTCG CCGTTGCTCGACGGCTACCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGGCTGGCCGCGATCGCGTTCAGAACCACATGCGGATACCGGCGACGAAGCGCGCCTCGTCGTCGTCCTCGCCCTCGGCGCGGGCCAGGTCGGCGCTGTT GCCGTAGGAGCGGTTCCAGGTCACCCCGATGTAGGGCGCGAACTCGCGACGGATCTCGTAGCGCAGGCGCAGGCCCAGCTCGCTATCGGCAAGGCCCGAA CCGATGCCGCGGGCGGGATCGTTCCTGCCGTACAGGTTGACCTCGGCGCTGGGCTGGAGGATCAGCCGGTTGGTCAACAGGATGTCGTACTCGCCCTCCA GGCGCAGCGCGCTCTGGCCGTTCTCGCCGAGGAAGGCGGTGACTTCCGCCTCGAAGTCGTAGAGCGCCAGGCCCTGCACGCCGAACGCCGCCCAGGTCTG CGGCGAGCCGGGCTTGAAATCCTGGCGCACGCCGGCGACCAGGTCCCACCAGGGACCGATGGCGTGCCCGAACAGCGCCTGGACCTCGGCGTCCTCGGTC
|
|
Amino Acid Sequence |
>hypothetical protein
MDDLSPDSALPPAGSAQDNDAPRQLVVCIDGTSNRFGDQPTNVVRLYRSLSRDPRRVLAYYDQGVGTFGLKETLFEWQKFPSRIAGLAFGWGLKRNVEGA YRFLAEHYRPGDQIFLFGFSRGAYAVRVLAAMLRAVGLIDAHQPHLFDYAWTLLTTRMPPRDEDKRAGTRRRGPDFGLLGRFRKVFGRQVKVHFLGLFDT VTSVGWVYDPLTVPYSSNNEMVDVVRQALAIDECRCFFRQNLWFGEKDRKSDVLQVWFPGMHSDVGGGYAPKDSRLALVAFTWMLGEALEAGLHVDPARS RDQLRARSKQGPDPTAPILPVMTRPWRLAEWLPLLVWDRRSGNRAWRWSRGRPRSRPLEPVGQETRVKLHRSVQRRLDECPDYRPCNLPALERCDLIDDS PLLDGYR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|