Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACAGGCGCTACCTGGCGACCAAGGCCGGCAAGCTCGGGCACATGCTCGGCAGCCTGCACCAGGGCGAGGCGGAAACCACGTGAGTCGCCAGCAAGCCC GCGGCGCGCTGGGACGTGCCTGGTGGTTGCAACTGGCGTTGGCGCTGTTGCCGCTGATCCTGGTCGAGTTCTTCCTCGGCGAACTGCAACCCCTTCCCCA TGGCCTGGCGATGCCGCTGTTCATCGCCGCGCTGCTGTCGATGTTCGTCAATCTGCCGCTGTTCGGTGCCTACAAGCGTGGTCTCATCGCCACCCAGAAA GCGCTGGATACGGCGGAGGAAGCCGCCGCCTGGACCCGTCTGGCGCAGGTGCGCCGCAAGGCCCTGTTCGGCGCCAGCCTGCCGGCCTGGATCGGCGTGC CGGGTGTGTTCGCCGGGCTCAACGGCGTTGCGCTGATCCTGCTCGGGGTCACCAGCCTGGTGCTGTTCTGGCTCTACCGTATTCCGCGTCAACTCGGTTG
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DNA Sequence for Gene |
>NQ07_RS22975
ATGCGCTCGTTCTGGCTGCTCGCCTGCCTGCTCCTCAGCCTTTCCGCCGGGGCGGCGCAGCGGGTGGTCAGCCTGGCGCCTTCGCTGACCGACAGCGTCC TCGAACTCGGCGCCGCGCGCCGCCTGGTCGGCGTGCTGGATGGTGGCGAGCGTCCGGCGGCGATTGGCGACCTGCCTTCCGTCGGCCGCTACGGCCAGGT CAATCTCGAACGCCTGCTGGAACTGCAGCCCGATCTGATCCTGGTCTGGCCCGGCAGCGTGCCCGAGGCGCAGTTGCAGCGTCTGCGGGACTTCGGCATC GCCCTCTTCATCGCCGAACCGCACAGCCTCGACGAACTGGCCCTGCAACTGGCTGCGCTGGGCGAGGCATTGGGCGAGGCCGAGGCCGGCCAGCGGCTGT CGACCAGGTTCCGCGAAGGCATGCGGCGCCTGGCCGAGCGCTACCGGCGGGACAAGCCGCTGAAAGTGTTCTACCAGGTCTGGGACCGGCCGCTGTACAC CATTGGCGGACGCCAGGTGATCAGCGATGCGCTGCGCGTCTGCGGCGCCGAGAACATATTCGGCGACCTGCCGCAGCCGGCGCCGCAGGTCAGCGTCGAG GCGGTTCTGGCGCGCGATCCGGCGGCCATCGTCGCCGGCAGTCACGCCCAGCTCGAACTCTGGCGGCAATGGCCGGCGCTGGCGGCGACGCGGCGCGGAC AGCTGTACCGGATCGAAGACAAGAACCTCGAGCGGCCGAGCTTCGCCATGCTGGCGGCGACCGAGAAACTCTGCCGCTCGCTCGCCGGGGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCTTGCCGGTATCGCGCGCTGTATCGGCGGATAACGCCGGCGGCGTTATTCGCCCTACGGCAATTGGGGGGGAGGGCGAATAACCGCAACGCGGTTAT CGCTGCCAGTCGGCGGGGCATGTCGGTATGGTGGTGTATCGGCGGATAACGCCGGTGGCGTTATTCGCCCTACGGCAATTTGGGGGTAGGGCGAATAACC GCAACGCGGTTATCCGCCGTTGTCGCTGGGTTTGGCGCTACTGCCGGTCGAGACGCTGGCGTACTGCCTTTTCGATGCCCGCGGCATCCAGGCCGCATTC GGCGAGCATCTCGCTGGGCTTGGCGTGTTCGACGTAGTAGTCGGGCAGGCCCAGTTGCAGCAGCGGGACTTCGAGGCCCTCGCTGGCGAGGAACTCGCCG ACCGCCGAGCCGGCGCCGCCCATCACGGCGTTTTCCTCGATGGTCACCAGCAGTTCGTGGCTGCCCGCCAATTCGCGTACCAGGGCTTCGTCGAGGGGTT
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Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVGVLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGI ALFIAEPHSLDELALQLAALGEALGEAEAGQRLSTRFREGMRRLAERYRRDKPLKVFYQVWDRPLYTIGGRQVISDALRVCGAENIFGDLPQPAPQVSVE AVLARDPAAIVAGSHAQLELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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