Pseudomonas aeruginosa AZPAE12146, NQ07_RS22255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_20, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGTCTGCTCACCGAGCAGGACGGCGAAGTCGGCATCGTCCTGGGCCAGCACCATATCCGTGCCACCACTGGCGAATTCACCTTCACTTCGAAGCTGGT GGACGGCAAGTTCCCGGACTACGAGCGTGTACTGCCGCGCGGTGGCGACAAGCTGGTGGTCGGTGACCGCCAGCAACTGCGCGAAGCCTTCAGCCGTACC GCGATCCTCTCCAACGAGAAGTACCGCGGCATTCGCCTACAGCTTTCCAACGGTTTGCTGAAAATCCAGGCGAACAACCCGGAGCAGGAAGAGGCCGAGG AAGAAGTGCAGGTCGAGTACAACGGCGGCAACTTGGAGATAGGCTTCAACGTCAGTTACCTGCTCGACGTGCTGGGTGTGATCGGTACCGAGCAGGTCCG CTTCATCCTTTCCGATTCCAACAGCAGCGCCCTGGTCCACGAGGCCGACAATGACGATTCTGCCTATGTCGTCATGCCGATGCGCCTCTAAACATACTGA
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| DNA Sequence for Gene |
>NQ07_RS22255
ATGTCCCTGACCCGCGTTTCGGTCACCGCGGTGCGCAACCTGCACCCGGTGACCCTCTCCCCCTCCCCCCGCATCAACATCCTCTACGGCGACAACGGCA GCGGCAAGACCAGCGTGCTCGAAGCCATCCACCTGCTGGGCCTGGCGCGTTCATTCCGCAGTGCGCGCTTGCAGCCGGTGATCCAGTATGAGGAAGCGGC CTGCACCGTATTCGGCCAGGTGATGTTGGCCAACGGCATTGCCAGCAACCTGGGGATTTCCCGTGAGCGCCAGGGCGAGTTCACCATTCGCATCGATGGG CAGAACGCCCGAAGTGCGGCTCAATTAGCGGAAACTCTTCCACTGCAACTGATCAACCCGGACAGCTTTCGGTTGCTCGAGGGAGCGCCGAAGATCCGCC GACAGTTCCTCGATTGGGGAGTGTTCCACGTGGAACCTCGGTTTCTGCCCGTCTGGCAGCGCCTGCAGAAGGCGCTGCGCCAGCGGAACTCCTGGCTCCG GCATGGTAAACTGGACCCCGCGTCGCAAGCGGCATGGGACCGGGAATTGAGCCTGGCCAGCGATGAGATCGATGCCTACCGCAGAAGCTATATCCAGGCG TTGAAACCGGTATTCGAGGAAACCCTCGCCGAATTGGTTTCACTGGATGACCTGACCCTTAGCTACTACCGAGGCTGGGACAAGGATCGGGACCTCCTGG AGGTCCTGGCTTCCAGCCTGTTACGCGACCAGCAGATGGGCCACACCCAGGCGGGACCGCAGCGTGCGGATCTTCGCATACGGTTGGCAGGTCATAACGC CGCGGAGATTCTCTCGCGCGGTCAGCAGAAGCTGGTGGTATGCGCCCTGCGCATCGCCCAGGGCCATCTGATCAATCGCGCCAAGCGCGGACAGTGCGTC TACCTGGTGGACGACCTGCCCTCGGAACTGGATGAGCAGCATCGAATGGCTCTTTGCCGCTTGCTTGAAGATTTGGGTTGCCAGGTATTCATCACCTGCG TGGACCCGCAACTATTGAAAGACGGCTGGCGCACGGATACGCCGGTATCCATGTTCCACGTGGAACATGGAAAAGTCTCTCAGACCACGACCATCGGGAG TGAAGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGAGAACAACACGTACGACTCTTCCAGCATCAAGGTGCTGAAGGGGCTGGATGCCGTACGCAAGCGCCCCGGCATGTACATCGGCGACACCGACGATGG CACCGGTCTGCACCACATGGTGTTCGAGGTGGTGGATAACTCCATCGACGAAGCGCTGGCCGGTTACTGCAGCGAAATCAGCATCACCATCCATACGGAT GAGTCGATCACTGTCCGCGACAATGGACGCGGTATTCCGGTGGATATCCACAAGGAAGAAGGGGTTTCTGCGGCGGAAGTGATCATGACCGTCCTCCACG CCGGCGGCAAGTTCGACGACAACACCTACAAGGTGTCCGGCGGCTTGCACGGTGTGGGCGTCTCGGTGGTGAACGCGCTGTCCCATGAACTACGCCTGAC CATCCGTCGCCACAACAAGGTCTGGGAACAGGTCTACCACCACGGCGTTCCGCAGTTCCCACTGCGCGAAGTGGGCGAGACCGATGGCTCCGGCACCGAA
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| Amino Acid Sequence |
>recombinase RecF
MSLTRVSVTAVRNLHPVTLSPSPRINILYGDNGSGKTSVLEAIHLLGLARSFRSARLQPVIQYEEAACTVFGQVMLANGIASNLGISRERQGEFTIRIDG QNARSAAQLAETLPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPVWQRLQKALRQRNSWLRHGKLDPASQAAWDRELSLASDEIDAYRRSYIQA LKPVFEETLAELVSLDDLTLSYYRGWDKDRDLLEVLASSLLRDQQMGHTQAGPQRADLRIRLAGHNAAEILSRGQQKLVVCALRIAQGHLINRAKRGQCV YLVDDLPSELDEQHRMALCRLLEDLGCQVFITCVDPQLLKDGWRTDTPVSMFHVEHGKVSQTTTIGSEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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