Strain | Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTGGCTGGGCGCAGATGCGCACGGCGGTGGAAGGCGGACGCTGGGACCTGCTGGTCAGCTCGCCATTGCAACGTTGCCGCGCCTTCGCCGAGGAACTGG CGCAGCGCCAGGGGATCGAGCTGGAACTGGAAAACGATCTGCGCGAATTGCATTTCGGCGCTTGGGAGGGGCGCTCGGCGGCCAGCCTGATGGACGGCCA CAGCGAGGCGCTCGGCCGCTTCTGGGCCGATCCCTACGCCTTTACCCCGCCGGGCGGCGAGCCGCTGTCCGAGTTCGAGGCGCGGGTGCTGGCCGCCCAG CGACGCCTGCGCCAGCGTCACGCCGGCCGTCGTGTGCTGCTGGTGACCCATGGCGGCGTCATCCGTCTGTTGCTCGCTCGCGCCCGTGGCTTGCCGCGCG AGCGCTTGCTGCAGGTGGACGTCGGTCATGGCGCACTGTTCGGCCTGCGCGCCGGAGAGGACGACGATCGCTGGCACGAATGCCGGGAAGGGGAATAGCC
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DNA Sequence for Gene |
>NQ07_RS05155
ATGCGCGAAGCCTTGCGCTCACTGCTGGTCGCCTTGCAGTTCCTCACCCGCCTGCCGGTGCGCCTGTCGGCGATGCCGACGCCGGAACAGTTCGGCCGCG CGGTGCTCTGCTATCCACTGGTCGGGGTGCTGATCGGCGTCGTGCTGTACGCCGCGGCGCGGTCGCTCGACGGTACGCCGCCGCTGTTGCAGGCAGCCTT GCTGCTGAGCCTGTGGGTGGCGCTGAGCGGCGCGCTGCACCTGGACGGCCTGGCCGACATGGCGGACGCCTGGGTCGGCGGGCTGGGCGACCGCGAGCGG ACCCTGGCGATCATGAAGGACCCGCGCAGCGGCCCGGTGGCGGTGGTGGTCCTGGTACTGGTCCTGTTGTTGAAGTTCTCCGCCCTGGCGGCGCTGCTCG GCCAGGGCGAGGCCGGGTTGTTGCCGCTGGCCCCGTGGCTGGCGCGCAGCAGCCTGCCGCTGCTGTTCCTGACCACGCCCTACGCGCGCCCCGGCGGCCT CGGCCAGGCCATCGCCGAGCACCTGCCGGCGCGCAGCCTGCCGTGGGTGCTGGGAGTGAGTTTCGGCCTGGCCCTGGCGTTCGGCCTGGCCGGCCTGCTG GCGTTGCTGGTGACGCTGATGCTCTTCGCCTGGCTGCGCAGCCGTTTCCTCGCGCGCCTCGGCGGCACCACCGGGGACACCGCCGGCGCGCTGGTCGAAC TTACCGAGTGTGCGGTGCTGGTGGCGCTGGCTCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGACGCGGCTGGCGCAGGACCGCCATGGCGCTGAGGAAGAGCAGCGCGGCGGCGGCCAGTAGCACGGCGACGAAGGCCTGGTCGAAAGCCTGCCGGGC AAGCTCGACGAGCCGCGACGCGACCTCCGGCGCCAGGCCCTCGGCGACCAACAGGGCGTCGTCGAGGCTGTCGCGGACCCGCGCCGGCAGCTCGGCCGAG GGCAGCCTCAGCGACATCCCGTAGACGAAACTCATCAGGCTGCCGAGCAGGGTCACGCCGATCACCCCGCCCAGTTCGTAGGATACGTCCTCGATGGCGG CCGCCATTCCGGAACTCTGTTCGTCCACGTTGAGCATCACCGCGGTGGAGGCGGCGGTCATCGCGCCGCCGAAGCCGACGCCGAGCAGCACCAGGCTGGC CAGTTGCGCTCCGGTGGCGGCCTGGTAGGACAGGGCCAGGCCGAGCAATCCGGCGCTGCCGAGCAGCAGGGAGGCGCACATCACCCGGTTCTCGCCCCAG
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Amino Acid Sequence |
>cobalamin synthase
MREALRSLLVALQFLTRLPVRLSAMPTPEQFGRAVLCYPLVGVLIGVVLYAAARSLDGTPPLLQAALLLSLWVALSGALHLDGLADMADAWVGGLGDRER TLAIMKDPRSGPVAVVVLVLVLLLKFSALAALLGQGEAGLLPLAPWLARSSLPLLFLTTPYARPGGLGQAIAEHLPARSLPWVLGVSFGLALAFGLAGLL ALLVTLMLFAWLRSRFLARLGGTTGDTAGALVELTECAVLVALAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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