Pseudomonas aeruginosa AZPAE12146, NQ07_RS03155
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009103 | lipopolysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF02706
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02706 | Chain length determinant protein | IPR003856 | Polysaccharide chain length determinant N-terminal domain | 13 | 81 | 5.6E-14 |
| Pfam | PF13807 | G-rich domain on putative tyrosine kinase | IPR032807 | Tyrosine kinase, G-rich domain | 368 | 415 | 6.0E-9 |
| PANTHER | PTHR32309 | TYROSINE-PROTEIN KINASE | - | - | 1 | 430 | 4.5E-55 |
| Coils | Coil | Coil | - | - | 222 | 242 | - |
| Gene3D | G3DSA:3.30.1890.10 | - | - | - | 62 | 219 | 8.3E-8 |
| Coils | Coil | Coil | - | - | 319 | 346 | - |
| SUPERFAMILY | SSF160355 | Bacterial polysaccharide co-polymerase-like | - | - | 221 | 332 | 4.58E-15 |
| Gene3D | G3DSA:3.30.1890.10 | - | - | - | 220 | 337 | 1.7E-20 |
| SUPERFAMILY | SSF160355 | Bacterial polysaccharide co-polymerase-like | - | - | 71 | 220 | 4.97E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.