Pseudomonas aeruginosa AZPAE12146, NQ07_RS01840

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGTTTCACACGCCGATCATCTTCGTCGGGCACTCTGGAAACCTCTCTCTTCGCGGAGCGGCATCCGGTGAGGCGACCCCGGCAAGGCGGTTTCACCCTG ATCGAACTCATGGTGGTGCTGGTAATCGTCGGCATCGCCACGGCGGCCATCAGCCTGAGCGCCCGCCCCGACCCGACGGGCCTGCTGCGCCAGGATGCCG CGCGCCTGGCGCGGTTGCTGGAAATAGCCCAGGGCGAAGCGCGGGTACGCGGTACGCCGATCCTCTGGCAGCCCAGCGCCAAGGGCTATCGCTTCAGCCC GCAGGCCTATCGCGGCAAGACCGACGCCTTCGCCGCCGACACCGAATTGCGCGCGCGCGACTGGCAGGCCGCGCCGCTGCGGGTCAGCGTGCGCCCGCCG CGACCGGTGTTGCTGGACGCCGAATGGATCGGCGCGCCGTTGCGGATAACGCTCTCCGACGGCCAACACAGCGTCACCGTGCTGCGCGAGGCGAACGGCC
DNA Sequence for Gene
>NQ07_RS01840
ATGTCCGGGTACGCTGAACGCGCGACGACGCGGCGCCGGCAAGCCGGCTTCACCCTGATCGAGGTGATGGTCGCGATCATGCTCATGGCCATCGTCAGCC TGATGGCCTGGCGCGGCCTGGACAGCATCGCCCGGGCCAGCGCGCACCTGGAGGACAGCACCGAGCAGGGCGCCGCGCTACTGCGCGCGCTGAACCAACT GGAGCGCGACATCGCCCTGCACAGCGCCATCCGGGAGGAGTCCGGCCTGCCCAGCGGCGACGAGCCGATCCGGGCCGGCGACAGCCTGCCGCCCGGACTC GCACTGAAGCGCCTGAGCGAGATCCCATTGCGCCTGGACATCGTCCGCGCCAGTACCGAGCCAGGCGCGCCGCTGCAGCGCGTGCGCTGGTGGCGACAGG GCAAGGTCCTCTACCGCGCCGCCTCGCCCAGCGGCGACCGCCTGCCGTTGCCGCCGCTGGCAGAGCGGGTGGCTGTGCTGGACGACGTGAGTCGGTTCGA GATCCGTGCCTGGGTGCCGGGAAAGGGCTGGACGCGCCTGCCGGCACGCAGCAAAGTCCGCGCCAGCGGACTGGAGATCAGCCTGGCGCGGGTCACCCGC AACGGCGTGGAGCGCTATCGACGGGTGGTGGCCCTGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGGTGGCTCAGCCGAGCAGCACCACCCCGCCCGGCAGGCGGGTGACCTCGATGCCATAGGCATCGCGGATCAGGGTCGCCACGTCGGCCAGTTGGTCG AGGCTGAAACGGGCCTGGACCCGGCGTCGGCCAAGGGCCTTGTCCAGCAGCAGGAGCATGCCGGGACGGTAGCGGTTGATTTCGTCGATCACCGTGGCCA ACGGTACGTCGTTGAACACCAGCATGCGCTCGCGCCAGGCCATCACCTCGGCAACGTCGAAAGGCACCGGCGGACCGTTGCGTCGCTCGTCGAAGGTCAG CTGCTGGCCGGCCTGGAGGTCCAGGCGCTGGCCGAGGTGTTCGAGCCGCACGCTGCCCTCCAGGCAGGTCACCACGCAGACGTCACCGCTGCTGCGCACA TTGAAGCGGGCCCGGCTGGCGCTCAGCCAGGCGCTCCCGGCCATCACCCGCAGGCTGCTCTGCGGCGGGTGGCTGGCGATGATCTCGGCCTCGCCGCCGA
Amino Acid Sequence
>HxcW putative pseudopilin
MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREESGLPSGDEPIRAGDSLPPGL ALKRLSEIPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFEIRAWVPGKGWTRLPARSKVRASGLEISLARVTR NGVERYRRVVALQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site