Pseudomonas aeruginosa AZPAE12146, NQ07_RS12135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 230 317 7.85E-34
Gene3D G3DSA:3.55.50.10 - - - 1 51 2.4E-8
MobiDBLite mobidb-lite consensus disorder prediction - - 131 157 -
Gene3D G3DSA:4.10.220.110 - - - 88 148 9.4E-14
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 3 359 2.7E-120
Pfam PF05954 Phage tail baseplate hub (GPD) - - 5 193 1.7E-38
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 341 447 1.2E-34
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 252 319 5.3E-14
SUPERFAMILY SSF69349 Phage fibre proteins - - 308 359 1.18E-9
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 224 322 6.1E-40
PANTHER PTHR32305 - - - 5 590 1.5E-126
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 3 368 9.6E-92
SUPERFAMILY SSF69279 Phage tail proteins - - 3 48 1.87E-8
SUPERFAMILY SSF69279 Phage tail proteins - - 63 231 1.29E-31
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345 481 625 2.4E-49
MobiDBLite mobidb-lite consensus disorder prediction - - 131 155 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.