Pseudomonas aeruginosa DK2, PADK2_03615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0017000 | antibiotic biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF03284
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pdk02024 | Quorum sensing | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.10.450.50 | - | - | - | 12 | 152 | 5.9E-49 |
| FunFam | G3DSA:3.10.450.50:FF:000014 | Phenazine biosynthesis protein PhzB 2 | - | - | 12 | 152 | 1.1E-91 |
| Pfam | PF03284 | Phenazine biosynthesis protein A/B | IPR004964 | Phenazine biosynthesis protein A/B | 3 | 162 | 1.6E-96 |
| SUPERFAMILY | SSF54427 | NTF2-like | IPR032710 | NTF2-like domain superfamily | 19 | 148 | 1.43E-24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.