Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTTTGCGCCTTAGCGGGCCGATGGCTTGCGGCCAGTCCGGACTTTCGCCATCACCGGGAACCAGGATCACTACACCTTCGGCCTCGGCGGTGTTGGCTGG CAACCAGAGGGTGAGGAAGCTTTCGTCGCCGGCCTTGAGGATCTGCTGGCCGTCCTCCGGCAACTGGCGCTCCAGCCCCTTGGCCTCGTCCTGGCTGCGC TCGCTGACCGCCGGGCGTTCCACGGGGGCCGGCGGCTGGTCCTTGGCGGCCTCCTCTTCGGCTTGAACGAAAGCCGGCGGCAGGAAAGCGGCGGCCAATA GCAGCGGCAGCAGGACGGAGGGCTTCGGCAGTAGAGAGAAGGCCGGCATTGGAAATTCCCGATAGACAATTCAGAAGGCAGCCTAAACCCAGAGCACTTC TTTGTCAGGCCGAGCCTTCGCATGGTTCGCCGGTCGCGCTCGCGGTAAGGTATGCCCGCTTTTCCTTCCGTTGCGGTGTATTCCGTGGAGTGTCGCCGGC
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DNA Sequence for Gene |
>PADK2_03025
ATGTTGCGTCGTTGCTGTCTGCTCTTCTGCTGTCTGCTGTTGAGCCTGCCCGTGCGAGCGGAGGAGTCGGTCGCCTTGCCGCTGACGGCGGAGCTACGGA CCTGGCTGGCGGAGCATCGGGAATTGCGCGTCGGGGTGGTCACCGAAGCGCCCTATGCCCAGTACGACCGCCGCCTGCAACAGTATTCCGGGGCCAACGT GGAGCTGATGGGCTGGCTGGCCACGGCAATGCAGGTGACCTTGCGGTGGCAGGGCTATCCCGACCAGGCGGCGCTCGACGATGCCCTGCGCGCTGGGCGC GTGGATATCGCTCCCGGCCTCAGCCAGACCCCAGCCGGGCTGCGCTTGTGGCTGTTCTCCGATCCCTACCTGCGGGTTTCCCGGCTGGTGGTGGGGAAGC GCGATGGCAGCGGCAGCGTCGAATTGGAGCAACTGGAGCGCGATACCCGGGTTGCCGTGCGGGCCGGCAGTTCGGTAGCCGACTACCTCAGCAGCACCTA TAGCGGCCTGCAATGGGTGTCGGCCGATTCCGAACGCGAGGTGCTGCGCGCCGTGCTCGCCGGACAGGCACGCTACGCGGTGATCGACGAAGCGCAACTC AGCCGCCTGACCCGCGAACCGGAGTTCGCCGAGCTAGCGGTGGTTGGCGATATCGGCTACCCGCAGCTGCTACGGGTGGCGACCCGTCGCGACTGGCCGG AACTGGCGATGGTGGTCGACCAGGCGTTGCGCTCGCTGCCGCGCAAGTCCCTGGACCAGTTGCACGAGCGCTGGTTGCAACCCAAGTATCCGCGCCTCGG CGAGTCGCCGGGGTTCTGGCAGAACCTGTCGATCCTCCTCGGCCTGCTGCTGGCCGGCGCGCTGGCTGCGGTGTTCCTCCAGCGGCGCCAGCAGCATGCG CTGGAAGCCCGGCTGTACGGCGCCCGCCGCGACCTGGAGCTGCGCCAGGCGGCCGAGGAGGCGCTGCGCCTGACCCAGTTCTCCATCGACAACAGCACCC TGGGCATCCTCTGGGTCAACTGGGACAGCCGCGTACGCTACGCCAACCGCGCCGCCGAACAGATGCTCGGCCATGCCGACGGCCAACTCGTGGACCGTCC GCTGGCCGACTTCGAGCCCGGCCTGGACATGGACCGCTGGTTGAATCTTTGGCGTCGTGCGCGCAATAGCGAGGAGGGCCCGCTCAGCTTCGAGACCCGA TGCCTGCGCGCCGACGGCAGTTGGCTGCCGGCCGACGTCTCGCTTAGCTTCCTGCGCTTCGGCACGTCCGAGTACCTGGTGGTGTTCCTCAGCGACGTCA CCGAGCGCCGCCGTGCCCGCGAGGCATTGCAGGAAAGCGAGGCGCGGATGAAGGGCATCGCCTCCAACGTGCCGGGCATGGTCTTCCGCCTGGAGCGCCC GCGGGCCGGCGCGTTTTCCGACTTCGCCTATATCAGCGAGGGCAGCGAGGCGCTGGTCGGCTACAGCGCTCGCGAACTGATCGAAAGCGGCCGCGGCATT CGTGGCCTGGTCCATCCCGACGACCGCGAGCGCTACTGGTCGAGCCAGATGGCTGCCCTCGACGAGAATCGCGACTGGCATTGGCAGGGCCGCATCCTCA CCCGCCAGGGCGAATTGCGCTGGGCCGACATCAAGGCTTCGGCGCGCTGTTTCGAGGATGGTCGCGCGGTCTGGGACGGGGTGGTCTGGGACATCACCGC GAACAAGCAGATCGAACTCGAACTCGGCGAGTCGCGCGCCCAGCTCCGCGAGCTGTCGGCGCACCTGGAGTCGGTGCGGGAGGAGGAGAAGGCGCGTATC GCCCGCGAGGTCCATGATGAGCTGGGCCAGGTGCTGACGGTGCTGAAGCTGGAAACCTCGATGTGCGAGCTGGCCTATGCCGATGCCCAGGAGGGCCTGC GCGAACGCCTGGGCAACATGAAAAAGCTGATCGCCCAGTTGTTCCAGCTGGTGCGCGACGTGGCTACCGCACTGCGCCCGCCGATCCTCGACGCCGGAAT CGGCTCGGCGGTGGAGTGGCAGGCGCGGCGCTTCGAGGCGCGCACGCAGATTCCCTGCCTGGTGGAGGTGCCGGAGAACTCGCCGCAGTTGGTCGACGCC AAGGCTATCGGCCTGTTCCGCATCCTCCAGGAGGCGTTGACCAATGTCATGCGGCATGCCGAGGCGCATACTGTGCAACTGCGTCTGCTGCGCGAGGGCG ACGAGCTGTGCCTGAGCGTCAGCGACGACGGTCGCGGGTTCGATGTTGCCACGGTGGGGCGTGGCAGTTCCTTCGGCCTGGTCGGCATGCGCGAGCGGGT GCTGATGATGGGCGGTACGCTGGACATCGACAGTGCCCCCGGCGAGGGCACCACGCTCAGCGTGAGGATTCCGCTGGGCGTCGCGAGCCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAAGAACAACCGCCGGCAAGGCGGAACAGCGTGAGGCAGCAAAGAGTGGTGATCCGAGTCCTGGTCGCTGAAGACCACACGATCGTCAGGGAAGGCATCA AGCAACTGATTGGCATGGCCAAGGACCTGCAGGTGGTCGGCGAGGCCACCAATGGCGAGCAGTTGCTGGAAACCCTGCGCGGAACGCCTTGCGAGGTGGT CCTGCTGGATATCTCCATGCCCGGCGTCAATGGCCTCGAGGCGATTCCGCGGATTCGCGCGCTGAACGAGCCGCCGGCGATCCTGGTGCTGTCGATGCAC GACGAGGCGCAGATGGCCGCCCGCGCCCTGAAGATAGGTGCTGCCGGCTATGCCACCAAGGACAGCGATCCGGCATTGCTGCTCACCGCGATCCGCAGGG TCGCCGGCGGCGGACGCTACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTTGGCCTGACCGATTCGCGTCCGCCCCATGCGCTGCTCTCCGA
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Amino Acid Sequence |
>two-component sensor
MLRRCCLLFCCLLLSLPVRAEESVALPLTAELRTWLAEHRELRVGVVTEAPYAQYDRRLQQYSGANVELMGWLATAMQVTLRWQGYPDQAALDDALRAGR VDIAPGLSQTPAGLRLWLFSDPYLRVSRLVVGKRDGSGSVELEQLERDTRVAVRAGSSVADYLSSTYSGLQWVSADSEREVLRAVLAGQARYAVIDEAQL SRLTREPEFAELAVVGDIGYPQLLRVATRRDWPELAMVVDQALRSLPRKSLDQLHERWLQPKYPRLGESPGFWQNLSILLGLLLAGALAAVFLQRRQQHA LEARLYGARRDLELRQAAEEALRLTQFSIDNSTLGILWVNWDSRVRYANRAAEQMLGHADGQLVDRPLADFEPGLDMDRWLNLWRRARNSEEGPLSFETR CLRADGSWLPADVSLSFLRFGTSEYLVVFLSDVTERRRAREALQESEARMKGIASNVPGMVFRLERPRAGAFSDFAYISEGSEALVGYSARELIESGRGI RGLVHPDDRERYWSSQMAALDENRDWHWQGRILTRQGELRWADIKASARCFEDGRAVWDGVVWDITANKQIELELGESRAQLRELSAHLESVREEEKARI AREVHDELGQVLTVLKLETSMCELAYADAQEGLRERLGNMKKLIAQLFQLVRDVATALRPPILDAGIGSAVEWQARRFEARTQIPCLVEVPENSPQLVDA KAIGLFRILQEALTNVMRHAEAHTVQLRLLREGDELCLSVSDDGRGFDVATVGRGSSFGLVGMRERVLMMGGTLDIDSAPGEGTTLSVRIPLGVASP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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