Pseudomonas aeruginosa DK2, PADK2_02045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TATCTGCCGGAAATCAAGGACGGCGACAAACGCATCCTGATGATCGACGGCGAACCGGTGCCCTACTGCCTGGCGCGCATCCCCGCCCAGGGCGAGACCC GCGGCAACCTCGCCGCCGGCGGCCGCGGCGTGGCCCAGCCGCTGAGCGAGCGCGACCGCTGGATCGCCGCCGAGGTCGGCCCGTACCTGCGCGAGCGCGG CCTGCTGTTCGTCGGCCTCGACGTGATCGGCGATTATCTGACGGAAATCAACGTCACCAGCCCGACCTGCATCCGCGAGATCGACCAGGCCTTCGACACC CGAATCGGCGACAAGCTGATGGACGCCATCGCCGCCCAGCTGGCTGCCCGCTGAATCGCGCGGGCGGGCCTCGGTCCGCCCGTCTCGGCCCGGCCGATGC GCCACGGCGAGCGACCGCGTGTCCAAGGCGCGGAGTGCGTCATAGACTTTTCCGCCCCCCATCGGCAGACTTCGCCCCACGCCAGCCACCACGATCCGCA
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| DNA Sequence for Gene |
>PADK2_02045
ATGAACGCCGCCGTCCTCAAGTCCCCCTCCGCCGCTGCCGGCGTCCGCCCGGCGGACCGTTTGGGCTTCACCCTGTTCATCGCAGCCATCCTGCACGTCG CCTTCATCCTCGGGGTGGGCTTCTCCATGCCCGCGCCGAGCCAGATCAGCAAGACCCTGGAAATCACCCTAGCCACCTTCAAGAGCGACAAGGCGCCGGA GAAGGCCGACTACCTCGCGCAGATGAACCAGCAGGGCAGCGGTACCCTGGAGCACAAGGCCGCGCCGAAGACCACCGAGGTCGCGCCATTCCAGGACAAC CAGGTGAAGAAAGTCGCGCCGCCGGCAACGCCGAAGCAGGCCAGGAGCGAAGAGGCGCCCAAGGCCGCGGTGACCACCACCCGCCAGCGCCAGCAGAAGG CACCGAGCAAGACCCAGGCACAGAAGGCCGAGCAGGTCGCCAAGCCGGCGCCGCATTTCGACTCAACCCAGCTGTCGGCGGAAATCGCCAGCCTCGAGGC CGACCTGGCCAAGGAGCAGCAGGCCTACGCCAAGCGCCCGCGCATCCACCGCCTGAGCGCCGCCTCGACCATGCGCGACAAGGGCGCCTGGTACAAGGAA GACTGGCGCAAGAAGATCGAACGCATCGGCAACCTCAACTACCCCGACGAGGCCCGCCGGCAGAAGCTCTACGGCAGCCTGCGGCTGCTGGTGTCGATCA ACCGCGACGGCACCATCTACGAGGTGCAGGTGCTGGAGTCTTCCGGCGAGCCGATCCTCGACCAGGCCGCCCAGCGCATCGTCCGCCTGGCCGCGCCCTA TGCGCCGTTCAGCGGCGACCTGGCCGACATCGACCGGCTGGAGATCATCCGTACCTGGCGCTTCGAACGCGGCGACCGGCTGTCCAGCAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGGCAAGGCTGGCTTTCTCGCGTCCGAAGCAGGACACTAGCGGCCATGAAACAGAGCAGCCCAACCTACCTCAAGCATCATTTCCTGATCGCCATGC CGCACATGGCCGACCCCAATTTCGCCCAGACCGTGACCTACCTGGTCGAACACAACGAGCAGGGCGCCATGGGCCTGGTGATCAACCGTCCCAGCGGCCT CAACCTGGCGGAAGTCCTCGAACAGCTCAAGCCGGACGCCCTGCCGCCGGCGCGCTGCCAGCACATCGACATCTACAACGGCGGCCCGGTGCAGACCGAC CGCGGCTTCGTCCTCCACCCCAGCGGCCTGAGCTACCAGTCGACCCTGGAACTGGGCGAGCTGGCGATGTCCACCTCGCAGGACGTGCTGTTCGCCATCG CCGCCGGCACCGGCCCGGAAAAGAGCCTGATCAGCCTCGGCTATGCCGGCTGGGAAGCCGGCCAGCTGGAGGCCGAGCTGAGCGACAACGCCTGGCTGAC
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| Amino Acid Sequence |
>tonB domain-containing protein
MNAAVLKSPSAAAGVRPADRLGFTLFIAAILHVAFILGVGFSMPAPSQISKTLEITLATFKSDKAPEKADYLAQMNQQGSGTLEHKAAPKTTEVAPFQDN QVKKVAPPATPKQARSEEAPKAAVTTTRQRQQKAPSKTQAQKAEQVAKPAPHFDSTQLSAEIASLEADLAKEQQAYAKRPRIHRLSAASTMRDKGAWYKE DWRKKIERIGNLNYPDEARRQKLYGSLRLLVSINRDGTIYEVQVLESSGEPILDQAAQRIVRLAAPYAPFSGDLADIDRLEIIRTWRFERGDRLSSK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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