Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCACCCTGGAGCTGGGTAGCTACAACGAGGTCAAGCTGCTGAGCTGGAACGAGGTGACCCTCAAGGACCTGCCCATCGTCGGCGGCATCCTCGGCTACG TGCCGGTGGTCAAGGACATCGGTGTCTCGCTGCCGACGCTGGACCTGCACTTCGACAGCAAGCTGTATGCGCAAACGATTGCCGGTGTCGATGTCGCCGG GGTCGGGCCGAAGGGCCAGATCGAGCTGGTGCATGACCTCGACAATGACCTGTCGATCGTCGCCGGTATCGCCGGGGATACCGCGCACAGCGCACTGGAC GGGGCCGGCAAGGTGCTCGCGGCGCTGCTCGGCCACGGCGGCGAAGCGGCGCCGCCGACAATCCAGCTGATCGGCGCCGACCCGGCGCCGGAGCATCAGG CCCTGGCCGCCTGACGGCGAGGGAACGCCCGGCACAGGGAGGTGCCATCCGGGCTCATTCGGGATTCCAGCGGCAGTCGTGGCAGAAGTGAGCGCGCTCG
|
|
DNA Sequence for Gene |
>NQ09_RS08595
ATGGCAAGGCTCGGTTCCAGCGTTACCAACGAAATCAAACAGGCCCTGGCGGCCAGCCGCGGCGCATTGCGCAGCGTGGCGGCGTTCTCCGGGGTGATCA ACCTGCTGATGCTGGTGCCCTCGCTGTACATGCTGCAGGTGTACGACCGCGTGCTGTCCTCGGCCAACGAAGTCACCCTGTTGATGCTGACCCTGATGGC GCTTGGCGTGTTCGTCTTCATGGGCGCGCTGGAGGCGCTGCGCAGCTTCGTCCTGGTGCGGGTCAGCGAACGCTTCGACGGCCAGTTGCACGGGCGGATC TACGCCGCCGCCTTCGAACGCAACCTGCGCGCCGGCGGCCAGGAGGCCAGCCAGGCGCTGCACGACCTGACCACCCTGCGCCAGTTCATCACCGGCCAGG CGCTGTTCGCCTTCTTCGACGCACCCTGGTTCCCGGTCTACCTGCTGGTGATCTTCCTCTTCGACCCCTGGCTCGGCCTGCTCTCGCTGGTCGGCGCGCT GGCCCTGATGGCCCTCGCCTGGTTCAACGAACGCGCCACCCGTGCGCCGCTGGCCAAGGCCGGCGAGTTGTCGATCAAGTCCGGCCAACTGGCCAGCAAC AACCTGCGCAACGCCGAGGTGATCGAGGCGATGGGCATGCTCGGCAGCATGCGCGGGCGCTGGGAACGGCTGCACCAGGCGTTCCTCGACCAGCAGAGCC TGGCCAGCGAGCGCGCGGCGCGGATCAACGCGCTGAGCAAATACCTGCGCATCGCCCTGCAATCCCTGGTGCTCGGCCTCGGCGCCTGGCTGGCGGTGGA GGGACGCATCACCCCGGGGATGATGATCGCCGGCTCGATCCTGATGGGACGTGCGCTGGGGCCTATCGACCAACTGATCGGCGTGTGGAAGCAGTGGGGC GCGGCGCGCGATGCCTATCGCCGGCTGAGCGGCCTGCTCGACGAATTCCCCGCCCGCGAGCGGCGCATGGAATTGCCCGAGCCGCGTGGCCACCTGCTGC TGGAATCGCTGGACGCGGCGCCGCCCGGCAGCGAGGCGCGCACCCTGCGTGGCCTGACCCTGGCGATCCCGGCCGGCTCGGTGGTCGGCGTGATCGGTCC GTCCGGCTCCGGCAAGTCGAGCCTGGCGCGGGTAGTGCTGGGCATCTGGCCGACCCTGCACGGCAGCGTGCGCCTGGACGGCGCCGAGATCCGCCAGTAC GAGCGCGAGACCCTCGGCCCGCGCATCGGCTACCTGCCGCAGGACATCGAACTGTTCGCCGGCACGGTGGCGGAAAACATCGCCCGCTTCGGCGAGGTGC AGGCCGACAAGGTGGTGGAGGCGGCGCGCCTGGCCGGGGTCCATGAACTGGTCCTGCGCCTGCCGCAGGGCTACGACACCGTGCTCGGCGTCGGCGGCGC CGGGCTTTCCGGCGGCCAGCGCCAGCGCATCGCCCTGGCCCGGGCGCTGTACGGCGCGCCGACCCTGGTGGTGCTCGACGAACCCAACTCGAACCTCGAC GACAGCGGCGAGCAGGCGCTGCTGGCGGCGATCCAGGCGCTCAAGGCGCGTGGCTGCACGGTGCTGCTGATCACCCACCGGGCCGGCGTGCTGGGTTGCG CCGACCGCCTGCTGGCGCTGAACGCCGGCCAGTTGCACCTGTACGGCGAGCGCGACCAGGTGCTCGCCGCCTTGAACAACCAGCGCGCCGCGTCGGCGTC GCAGCAGCGCGCGGACTACCGGGTGGCCGGCTACGGCGCGCCGCAGGTGGTGGCCGCGCCGCGCCAGGGAGGTGTGGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCGCACGGTGAAACGCGACGAGAACGCCTATGCGCGACTGGGCTGGCTGCTGGTCCTGTTCGGCTTCGGCGGCGCGCTGCTCTGGGCCGCCTTCGCGCC GCTCGACCAGGGCGTGGCGGTGCCGGCCACGGTGATCATCTCCGGCCAGCGCAAGTCGGTGCAGCATCCGCTGGGCGGGGTGGTCAAGCACATCCTAGTG CGCGACGGCCAGCATGTGGAGGCGGGCGAGCCGCTGATCCGCATGGAACCGACCCAGGCCCGGGCCAACGTCGATTCGCTGCTCAACCGGTACGCCAACG CGCGGCTCAACCAGGCGCGCCTGCAGGCCGAATACGACGGCCGGCGGACCCTGGAGATGCCCGCGGGGCTGGCCGAGCAGGCCCCGCTGCCGACCCTCGG CGAGCGCCTGGAGTTGCAGCGGCAGTTGCTGCACAGCCGCCAGACCGCGCTGGCCAACGAACTCTCCGCATTGCGGGCGAACATCGAGGGGCTGCGCGCC
|
|
Amino Acid Sequence |
>peptidase
MARLGSSVTNEIKQALAASRGALRSVAAFSGVINLLMLVPSLYMLQVYDRVLSSANEVTLLMLTLMALGVFVFMGALEALRSFVLVRVSERFDGQLHGRI YAAAFERNLRAGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGLLSLVGALALMALAWFNERATRAPLAKAGELSIKSGQLASN NLRNAEVIEAMGMLGSMRGRWERLHQAFLDQQSLASERAARINALSKYLRIALQSLVLGLGAWLAVEGRITPGMMIAGSILMGRALGPIDQLIGVWKQWG AARDAYRRLSGLLDEFPARERRMELPEPRGHLLLESLDAAPPGSEARTLRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQY ERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLD DSGEQALLAAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVLAALNNQRAASASQQRADYRVAGYGAPQVVAAPRQGGVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|