Pseudomonas aeruginosa DK2, PADK2_00815
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATATGCGGCGTTTTTTTTTGCCTTCCTGACCGTTCGGACAATTCTTGCAGAATATGTAAAAGACTTTCGTTGGATATCGGGTTTTTCCGATAGTGGCAAA AAAATATAATCGCGCCAGCTCAATGGATAATTGTCGCTGGCTGTCGACGATATTCGTTCTGTCTTCATCGATCTCGCCATGCAAGAGCGGGACGTGGAAA GCCTAAAGCCCGATGAGTCGAAGAGACTTTCAATAGAAGAGTCCGACTGCGTTCCAGCCGGTTTCCAGTGTCCGGAAATACACTGGCAAGACTTCCCGAC GCCGAACTTTGATTGCTCCTATTCGACGTCTTCTCAAGGCCGCTGATACCAGCGGCCTTTTTTTTCGGGTTGCGCCCGGCTGGGCGCCCCATGGGAGCGA TCGCCCGCGCGACGCCAGCAGAAGCGTCGCCGGGAACGACACCACAACACGCTTTCCGGCCTTGCCGGATTTCACCACGCTGTAAGAAGGAGCAACCGCA
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| DNA Sequence for Gene |
>PADK2_00815
ATGAGGAATCTGTTCGCCTTGACGCCGATGGCGCTGGCGCTGTGCACCGCGTCCGCCGCCTGGGCCGATGAGGGGGAAGCCAAAGAAGGCTTCATCGAAG GCTCCAGCCTCCAATTGCTGACCCGCAACTACTACTTCAACCATGACCGCCGGCACGCTTCCGGGCACGACAGCAAGGAATGGGCGCAAGGCTTCATCGC CACCTTTCAGTCCGGCTACACGCCCGGCGTGGTCGGCTTCGGCGTCGACGCCTACGGCATGCTCGGGCTGAAGCTCGACGGCGGCGGCGGTACCGGCGGC ACCAGCATCCTGCCGATCACCGCGCCGAGCAAGGATGGCTACGAATCCGGCAAGGCGCCCGATGAGTTCTCCAGTGGCGGGGCGGCGCTGAAGATCCGCG CCTTCGACACCGAGCTGAAGCTGGGCGACCAGTTCCTCAGCAACCCGGTGGTCGCCGGCGGCGAGTCGCGCATGCTGCCGCAGACCTTCCGCGGTGTGAG CCTGACCAACAACAGTTTCGAGGACCTGACCCTCACGGCTGGCCAGGTCAGTTTCACCAAGTACTACAACCAGAGTGGCCACCGTCGCCTCGGCTCGTAC TACGGCGAACTGCCGGGCGACCGCGACAGCCATCATCTCAGCTGGCTGGGCGGCACCTGGGGCGGCATCGAGGGCTTCACCAGCAGCCTGTACGCCGCCG AACTGCAGAACGTCTGGAAGCAGTACTACGGCGACGTCGACTACACCTACGAGATCGACGACAACTGGTCGCTGAACCCCGGCGCGCACTACTACAAGAC CGTCGACAGCGGCGACTCGTTGCTCGGCCGGATCGACAACAACACCTACAGCCTGCATTTCGCGGTCGGCTACAGGCAGCACACCGTCACCGCGGTGCTG CAGAAGGTCAACGGCAACACGCCGTTCGACTACATCAACCAGGGCGACAGCATCTTCCTCGACAACTCGCAGCAGTATTCCGACTTCAACGGTCCCAACG AGAAGTCCTGGAAGCTGCAATACGACTACGACTTCGTCGCCCTCGGCCTACCCGGCCTGAGCGCCTCGGCCTCGTACTCGCGCGGCAAGCTGGACCTGAC CCGGGTCGATCCGGACAGCCCCGGCTACGGCGGCTGGTACAGCGCCGACGGCAAGAACGCCAAGCACTGGGAACGCGACCTCGACCTGCAGTACGTGGTC CAGGGCGGTCCGGCCAAGGACCTCTCGCTGCGCCTGCGCTGGGCCACCCACCGCGGCACCGGCGGCTACAGCGCGGTGGACAACGACATCGACGAATACC GGGTGATCGTCGACTATCCCATCGACGTGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCCGCGCGCTGGGCCCTTCGCCGGGCTCAGCGCTGGCGGAACAGTTCGCCGGGAGTGAAGCCGAAGAGTCCCTTGAAGGCGGCGATGTAGGCCGAGGT CGAGTCGTAGCCGCTGTCCAGGGCGGCGCCGGTGACGCTGTCGCCGGCTTCCAGCGCGTTGAGCGAGGCGAGCAGGCGCTGGCGTTGGCGCCAGAGCCGG TAGTTCATCCCGGTCTCGCGCTGGAACAGGCGCGACAGGGTCTTTTCCGAGGTGCCCAGGCGCTGCGCCCAGTCGCCCATGGTCAGGCTCTGGGTCGGTT CGTCGATCAGTGCCTGGCACAGCCGCAGCAGGCGCGGCTCGCGCGGCATCGGCAGGGAGAAGGCGACCTCCGGCAGCAGCCGCAACTGGTCCAGCAGCAC CTGCACCAGCCGCGATTCGGCGCTGTCGCCCTCCGGGTAGTCCACCGGCAACTCGCAGAAACTCTTGATCAGCTCGCGCGCCAGCGGCGTCACCTCCAGC
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| Amino Acid Sequence |
>histidine porin OpdC
MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGG TSILPITAPSKDGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSY YGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYGDVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVL QKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVV QGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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