Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACACGGTGACGATCCCGGTGTCCTGGCAGATCGGGCGGTGGCCGGTGGCGCACATGCGCGAGTTGATCAGGATCTGCGCCATGGAGTCGCGGGCAGCCGG CGATTCTTCGCGCAGGTAGGCCTCATGCATGGCCTGGATGAAATCGACCGGGTGGTAGTAGGAGATGAACTGCAGGGCATCGGCGACGCTCTGGATCAGG TCGTCTTGCTTGATCACGGCCATGGAGCACGGTCCTCTTCAGGCGGGTAATTCGGATGCGGGGCAGGGTCACGGAGCCGGCCGCAGCCGAGGAGCGCGCC GGTCAGGCACCGGCGCAAAAAAGGCGCGACAGTATAGCCGTTCCGGCGAGACGGGCGCACGCGCCGACGATCAGACCTTGGTCGGCCAGCCGGCTGGTCG GCCGATAAATCCGCGGTCCGCTAGCTGGCAGTTCGTTCGACTAGGCAACCCGCAGGGGGCAGGGTACATTGCGGCCAGGTGCCATTACGGGACGGAGCCC
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DNA Sequence for Gene |
>NQ09_RS03560
ATGCGCACAGACAAGCCTCCCCTGAAACAGCGTGCGCTGCAAAAGCTCTTGCTCCGCCGGTTCGGCATGGCCGCAGGCACCTACCTGCTCGGCCTGGTCC TGCTCTGGCTGGCGCTACTCAGCGGCTTCTACCGCGCAGCGCCGACCACCGCGGCGGCCAGCACCACCCTGGTGGTGGCTTGCCAACTGGCCTTCCTCTG GCTGTTCGCCAGCGGACGCAACCTGCGTTACGCCGATCCCAGCCTGACCGAGCCGCAGGTGCTGGTGGCGATCGCCTGGCTGACCTATTTCCTCTACCAC GTCGACAGCCTGCGCGGCACCTTCATGGTGTTCTACGTGCTGGCCCTGCTGTTCGGCGTGTTCCAACTGCCGCCGCGGGTCTTCGCCCGCTGTGCGGCGC TGGCGTTCATCGCTTTTTCCGGCATCTACCTGGTAGAGGCCTTGCAGCAGCGTCTCGAGCTACCGGGCCGGGCTGCATTGCAGGTGCTCGTGATGTTCAT CGTAATGGTCTGGCTGAGCCTGTTCGCCAGCTACATACAGGCGATGCGGCAACGCATGCGCCAGCGCCGCTATGCCTTGCAGGCGCACCAGGACACGCTG CGCGGCATGATGCGCCAACTGGAAGACCTGGTGGCCACCGACGAACTCACCGGTCTGTTCAACCGCCGGCATTTCATGCGCATGGCCAGCCGGGCGCTGG AAGACCTGCTGCCGAACCGGCAGCACGGCCTGGCGCTGATCGACCTCGATCACTTCAAGCGGATCAACGACCGCCACGGCCACGCCGCCGGCGATCGGGT CCTGCAGACCTTCGCCGCGGTGGCGCGTTCCTGTCTGCGCGATGGCGACGTCCTGGCCCGTTACGGCGGCGAGGAGTTCGTCCTGCTGCTGCCCCACGCC GACGCGGAACAGCTGGAAAGCTGTTGCGAGCGCCTGCGCCTGGCGTTCCAACAGGCGGAACCGGTCGGGGTCACGGTGGATACCCTGAGCCTTTCGGTGG GCATGACCCTGCTGTATGCCGACGACGATCTCGACGAGGCCTTGCAGCGGGCCGACCAGGCGCTCTACCGTGCCAAGCGCGGCGGACGAAACCGCTGCGA CGCCACCTGGGAGGTCACCAGTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATACGGGTCGGCGAGCGACGCCTTGCCGTCGCCGCCGGCAGCAACCTGCTGGATGCGCTGCTCGCCGGCGGCATCGCCGTGCCCCATAGCTGCCGCGCC GGCAGTTGCCACGCCTGCCTGGTGCATTGCCTGCAGGGCGAGGTGGACGACACCCTCCCGGAGGCGCTCGATCCGGCACGGCGCGAAGCGGGCTGGCGGC TGGCCTGTCAGTGCCGGGTGCTCGGCGACCTCGTGTTGCAGCCTTTCGATCCTGAGCGCGACGGGCTGCCGGCCAGGGTCGTAGCCTGCCACTGGCTGGG CGATGTGCTGCGCCTGCGCCTGGAGCCGGAGCGGCCCTTGCGCTATCGCGCCGGGCAGCACCTGCTGCTGTGGAGCGACGATGGCGTGGCGCGTCCCTAT TCGCTGGCCAGCCTGCCTCACGAGGACCCATGGCTGGAGTTCCACATCGACTGTAGCGCTCCCGGCGCGTTCTGCGACCGCGCCCGGCGCCTGGCGCCTG
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Amino Acid Sequence |
>hypothetical protein
MRTDKPPLKQRALQKLLLRRFGMAAGTYLLGLVLLWLALLSGFYRAAPTTAAASTTLVVACQLAFLWLFASGRNLRYADPSLTEPQVLVAIAWLTYFLYH VDSLRGTFMVFYVLALLFGVFQLPPRVFARCAALAFIAFSGIYLVEALQQRLELPGRAALQVLVMFIVMVWLSLFASYIQAMRQRMRQRRYALQAHQDTL RGMMRQLEDLVATDELTGLFNRRHFMRMASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHA DAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGMTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWEVTSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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