Pseudomonas aeruginosa AZPAE12148, NQ09_RS28755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_31, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCCGTCGCCTGCTCTCTACCAGCCGCTGGCTCTGCGCCAGCCCCGACTACCTGGCGGCGCACGGCACGCCGACATCGGTGGCCGAGCTTGCCGGGCAT CGCGCGGTCCTTCTGTCCACCGACTCCCAGCGCTACTGGCCGCTTTCCGGAGACAGCCTGCCCTGCCAGCGGGTGCTGTCCTGCAACAACATCACCTTCG CCCGCGAGGCGGTGGTCGCCGGTGCCGGCATTGCCGCGCTACCGGCGCTGATCTGTGCGGAGAGCGTGCACAGCGGGCGTCTGGTGCGTTTGCTGGCGGA CGTGCCGTTGCCGGTCGGCGAACTGTATGCGGTCTATCCTTCGCGGCGTTTCCAGGCGATGAAGGTCAAGGCCTTCCTCGATTTCCTGATCAGCCGCCTG CCGGCCGACACCGGTCGTTTACTGGAGCCGGAGGCGGCCCGCCTGATAACATCGCGCCCCTGAATTTCCGTTTTAACTTCCGCTTGGCAAGAGAGTCTCC
|
|
| DNA Sequence for Gene |
>NQ09_RS28755
ATGACCACTGTTCGTACTCGCATCGCCCCGTCGCCGACGGGCGACCCGCACGTCGGTACCGCATACATCGCGCTGTTCAACCTGTGCTTCGCGCGTCAGC ACGGCGGTCAGTTCATCCTGCGCATCGAGGACACCGACCAGCTGCGTTCGACGCGGGAGTCCGAGCAGCAGATCTACGACGCCCTGCGCTGGCTCGGCAT CGAGTGGGACGAGGGCCCGGACGTCGGCGGCCCGCATGGCCCGTACCGGCAGAGCGAGCGCGGGCACATCTACAAGAAGTATTCGGACGAACTGGTCGAG AAGGGCCATGCCTTCACCTGCTTCTGCACGCCCGAGCGCCTCGATGCGGTTCGCGCCGAGCAGATGGCGCGCAAGGAAACCCCGCGCTACGACGGCCACT GCATGCACCTGCCGAAGGATGAGGTGCAGCGCCGCCTCGCCGCCGGCGAGTCCCATGTCACCCGCATGAAGGTGCCGACCGAGGGTGTCTGCGTGGTGCC GGACATGCTCCGCGGCGATGTCGAGATTCCGTGGGATCGCATGGACATGCAGGTGCTGATGAAGGCCGACGGCCTGCCCACCTACTTCCTCGCCAACGTG GTCGACGACCACCTGATGGGCATCACCCACGTCCTGCGCGGCGAAGAGTGGCTGCCGTCGGCGCCCAAGCTGATCAAGCTCTACGAGTATTTCGGCTGGG AGCAGCCGCAGTTGTGCTACATGCCGCTGCTGCGCAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACCTCTATCACCTTCTACGAACGCAT GGGCTACCTGCCGCAGGCGCTGCTCAACTACCTCGGGCGGATGGGCTGGTCGATGCCGGACGAGCGCGAGAAATTCACCCTCGCCGAGATGATCGAGCAT TTCGACCTGTCGCGCGTCTCCCTGGGCGGACCGATCTTCGACCTGGAGAAGCTCTCCTGGCTGAACGGGCAGTGGATCCGCGAGCAGTCCGTGGAGGAGT TCGCCCGTGAGGTGCAGAAGTGGGCGTTGAATCCCGAATACCTGATGAAGATCGCTCCGCACGTGCAGGGAAGGGTGGAGAACTTCAGCCAGATCGCGCC GCTGGCCGGATTCTTCTTCAGCGGCGGGGTGCCGCTGGACGCTTCGCTGTTCGAACACAAGAAGCTCGATCCGACCCAGGTCCGCCAGGTCCTGCAACTG GTGCTGTGGAAACTCGAATCCCTGCGCCAGTGGGAGAAGGAACGCATCACCGGCTGCATCCAGGCTGTCGCCGAACACCTCCAGCTCAAGCTGCGCGACG TGATGCCGCTGATGTTCCCGGCCATCACCGGGCATGCCAGCTCGGTTTCGGTGCTGGACGCCATGGAGATCCTTGGCGCCGACCTGTCGCGCTATCGCTT GCGCCAGGCCCTGGAGCTGCTGGGCGGGGCGTCGAAAAAGGAAACCAAGGAATGGGAGAAGATCCGCGACGCCATTCCCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGGCTTTCTTCTACAGTCGATGACGAGGCCCGCCCAGTTGCGGGCCTCGTTTTTTGGGGAGGGGAGGTAAGTGATTGTTCTTCCGGTAAAATTTTTTAG GTTTCGATGAAAAATAATGTTGACAGCCTCAAGCCTCACCCTTAGTATGCGCCCCGTCTTCACGACGAACTCAACGAAGTGAAGCGATCCAGCGGTACTT TGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATCCCGTCTAGCTCCACCAAATTGCCGGGAATACGCGGTTGG TTTTGCGGATTCCTACGAAGGTTTCGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCC ATTTCATGTTCATCCGTCCCAGCAATGGATGAGCGTGTCGATGACCGGAAGGTTGTCGAAGCGATCGGAAGATCGCTCGCCTGATGGCGAATTCGGGGCT
|
|
| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRESEQQIYDALRWLGIEWDEGPDVGGPHGPYRQSERGHIYKKYSDELVE KGHAFTCFCTPERLDAVRAEQMARKETPRYDGHCMHLPKDEVQRRLAAGESHVTRMKVPTEGVCVVPDMLRGDVEIPWDRMDMQVLMKADGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSITFYERMGYLPQALLNYLGRMGWSMPDEREKFTLAEMIEH FDLSRVSLGGPIFDLEKLSWLNGQWIREQSVEEFAREVQKWALNPEYLMKIAPHVQGRVENFSQIAPLAGFFFSGGVPLDASLFEHKKLDPTQVRQVLQL VLWKLESLRQWEKERITGCIQAVAEHLQLKLRDVMPLMFPAITGHASSVSVLDAMEILGADLSRYRLRQALELLGGASKKETKEWEKIRDAIPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|