Pseudomonas aeruginosa DK2, PADK2_00190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAAGCGCGCGGCGACGGTGGCGGTGGCCACGCCGTGCATGCCGGCGCCGGTCTCGGCGATGATGCGTTTCTTGCCCATGCGCCGGGCCAGGAGGATCTG GCCGATGCAGTTGTTGATCTTGTGCGCGCCGGTATGGTTCAGCTCCTCGCGCTTGAGGTAGATCTTCGCCCCGCCGCAGTGCTCGGTCAGGCGCTCGGCG AAGTACAGCGGGCTCGGCCGACCGACGTAGTCGCGCTGGAAGTAGGCCAGTTCCTCCTGGAACGCCGGGTCGTCCTTGGCCTTCTCGTACTCGCGGGCGA GGTCGAGGATCAGCGGCATCAGGGTCTCGGCGACGTACTGGCCGCCGAAGCGGCCGAACAGGCCCTTTGCGTCGGGGCCGTTGCGATAGGAAGTCATGGA GGGCTCCAGGAAATGACGTATGGGCAGAATCTAATCCCCCCGCCGGGTAAAAGAAACCGATAAGATTGCGCAAACCTGTCAGGAAAACTCACGAATAGCC
|
|
| DNA Sequence for Gene |
>PADK2_00190
ATGAGCCGCGACCTCCCTTCCCTGAATGCCCTGCGCGCTTTCGAAGCCGCTGCCCGGTTGCACAGCATCAGCCTGGCGGCCGAGGAACTGCACGTTACAC ATGGCGCCGTGAGCCGGCAGGTGCGGTTGCTCGAGGACGATCTCGGGGTGGCCCTGTTCGGCAAGGATGGACGCGGCGTAAAACTCACCGATTCCGGCGT TCGCCTGCGTGACGCCTGCGGCGATGCGTTCGAGCGACTGCGTGGCGTCTGTGCCGAGCTGCGCCGGCAGACCGCCGAGGCCCCGTTCGTCCTCGGCGTA CCCGGCAGCCTGCTGGCGCGCTGGTTCATCCCGCGGCTGGACCAGCTCAACCGTGCCCTCCCCGACCTGCGCCTGCAACTGTCCACCAGCGAGGGCGAGT TCGATCCGCGTCGTCCCGGCCTGGACGCCATGCTCTGGTTCGCCGAGCCGCCCTGGCCGGCGGACATGCAGGTCTTCGAACTGGCGCCCGAGCGCATGGG CCCGGTGGTCAGCCCGCGCCTGGCGCAGGAAACCGGCCTGGCCCAGGCGCCCGCCGCGCGGCTGTTGCAGGAGCCGCTGCTGCATACCGCCTCGCGACCC CAGGCCTGGCCGGCCTGGGCCGCGAGCCAGGGGCTGGCGGCGGAGGCGCTGCGCTATGGCCAGGGGTTCGAGCATCTCTACTACCTGCTGGAAGCGGCGG TGGCGGGCCTCGGCGTGGCCATCGCCCCGGAGCCGCTGGTCCGCGACGATCTCGCCGCGGGCCGCCTGGCGGCGCCCTGGGGCTTCATCGAGACCGATGC GCGCCTGGCCCTGTGGGTACCGGCACGCCTCCACGATCCGCGTGCCGGGCGCCTGGCGCAATGGTTGCGGGAGCAGTTGGCAGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCTGGCGATTTGCTGCACTTTTCCGGCTCGGCTAGTGTCCATTGAACAGAGGCGCCCGTCGGGCGCGAAGAACCAGGCATCGTCCGGGGAGAGAGTTC ATGTCCAATCACCACACCTACAAGAAGATCGAACTGGTCGGCTCGTCCAAGACCAGCATCGAGGACGCCATCAACAACGCCCTCGCCGAAGCGGCGAAGA GCATCCAGCATCTGGAATGGTTCGAGGTGGTGGATACCCGCGGGCACATCGAGAACGGCGCCGTCGGCCATTACCAGGTGACCCTGAAAGTAGGGTTCCG TATCGCCAATAGCTGATGGCACCCTGGAAACCTGTCCACGATCGCCTGCGCCCTGGAAAGGCCGCCGTGTCTTTCCGCTTCGCCGGATCATGCACAGGCT ATGAGGGCGGCGTGCCTCCATGGGCGGCGCGCTCGTCTCAACCTTGCCGCATTTGGCAAGCCTGACCCGTTCGGGTCTTCATCCATGCAACGAGGGAATG
|
|
| Amino Acid Sequence |
>transcriptional regulator TrpI
MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGV PGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRP QAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|