Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_29, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAATTCGTCGCAGCCGCCATAGGTCAGTTCGTTGGCTTCGATCGCCTGATCGATGAAGCGCAACATGAAAGCGTTCACCGCATCGGCATCCACGCCTT CCTTGTAGTGGAAGTTCAATTCGAAACCCAGCTCCTGGAATTCATCGACGCACAATTTCTTGCGCAGGCGGCGGGAACGATTAGTAGCCATGGCGGCATC TCCTGGATTGACGCTCCATTGGCGGAGCCTCGCATTACAGACAGTAGCCGACACCGCTGGAGCCGCGGGCGAACCCCGGCAAGCTCCGCTCGGCGCGGCC GGATTGCCGGCGCACTCTACCAGTTCCGACCATTCGGCGATATGACGGCGAACTCCGCGAAACTCCAGCGCATCGTTATCCGCCTTGCGGCATAATGAGC AAGACGGCCTCTTCGCGTGATGTCCGTCTCTTTTTCAGGTTCGCTTCGTTTTTCATCTTCATTTCATTTTCTACCCTCCGTCTTCAAGGGTTCTTCATTA
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DNA Sequence for Gene |
>NQ09_RS27665
ATGTTCAAGTCGCTGCGTACTCTTGCCTTCGCCACGCTCCTGCCTTTCGCCCTTCCCACTCTCGCCCAGGTCAACGCCACCCTGCCGGCCAACGTGCAGA AAGCCCTGCAGACTAACAAGCTGACCGGCAACGATCTGTCGCTGGTGCTGATTCCGCTCGACGGCCCGGGCAACCCCACCTACTACAACGCCGACGTATC GGTGAACCCGGCCTCGACCATGAAGCTGTTCACCACCTATGCCGCCCTGGAAATGCTCGGCCCGACCTACCAGTGGAAGACCGAGTTCTACACCGACGGC CAGCTCAAGAACGGAGTGCTCAACGGCAACCTCTACCTCAAGGGCGGCGGCGATCCGAAACTGAACATGGAGAAGCTCTGGCTGCTGATGCGCGACCTGC GCGCCAATGGCGTGACCAAGGTCACAGGTGACCTGGTACTCGACCGCAGCTACTTCAACATCCCGCTGCCGGTATTCAACGACGACGGCGGCGACGACAC CAAGCCGTTCCTGGTCGGTCCGGACTCGCTGCTGGTCAACCTGAAGAGCGTGCGCATGGTGGTGCGCACCGACGGCAACAAGGTCAACGTGCAGATGGAC CCGCCGCTGGCCAACGTACGCATCGACAACCAGGTGAAGATGACCGCGCCGGCCACCTGCCCGGCCTGGCCGAAGCTGCGCTTCAGCCCGGTGACCCAGT TCGACGGCACCACCCTGCTGGCCACCGGACAGATTCCCCAGGGCTGTAGCGCGCAGACCTACATGTCGCTGCTCGACCACCCCGGCTACACCGCCGGCGC GGTGCGCGGCATCTGGCAGGAGCTGGGCGGCAGCATCCTCGGCAAGGACCGCCAGGGCAGCGTACCGCGCAACGCCACGCTGATCGCCAAGGCCTTCTCG CCAGACCTGGTCGAGATCATCCGCGACATCAACAAATACAGTAACAACACCATGGCCCGGCAGTTGTTCCTCTCCATCGGCGCGCAGTTCCGCAACAGCG CCGACGGCGACGACGCCCAGGCCGCGCAGCGGGTGGTGCGGCAGTGGCTGGCGCGCAAGGGCATCACCGCGCCGCGCCTGGTGATGGAGAACGGCTCGGG ACTGTCGCGCCAGGAACGGGTCAGCGCCCGTGAGATGGCGGCGATGCTGCAAGCCGCCTGGCACAGCCCCTATGCAGCGGAGTACATCTCCTCGCTGCCG CTGGCCGGCCTCGACGGCACCATGCGCAAACGCCTGCGGCGCACCGCACTGGTCGGCGAGGCGCACGTGAAGACCGGCACCCTCAACACCGTGCGCGCCC TCGCCGGCTTCAGCCGCGACGCCAGCGGCCACAACTGGGTGGTGGTGGCGATCCTCAACAGCCCGCGGCCGTGGGGCGCTTCGGCGATCCTCGACCAGGT ACTGCTGAGCCTGCACGCGCGGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCAGTACGAAAAAAAAGGCCGCCAGCGGTTGCCCGCCGGCGGCCTTTTGCATGAATGCCGCTCGCCTCAGCGAACGGTGATTCTCCAGGCCCGATGG ATCTTCGGATTACGCGCGAAATCCGGATCGAGGGTTTCGCCAGTGATCTCTTCGACCGCATAGCGGGCCTGCACGCTCTCGTCCAGTTCGAACTTGCGGA AGTTGTTGGAGAAATACAGCACCCCGCCCGGCACCAGCCGCGCCATGGCCAGGTCGAGCAGTTCGACGTGGTCGCGCTGCACGTCGAATACGCCTTCCAT GCGCTTGGAGTTGGAGAAGGTCGGCGGGTCGATGAAGATCAGTTCGTACTGGCCATCGTCTTCCCGCAACCACTCCATCACGTCGCCGTGCACCAGGCGC TGCTTGTCGGAAAAGCCGTTGAGCGACAGGTTGCGGCGCGCCCAGTCCAGGTAGGTCTTCGACAGGTCGACGCTGGTGGTGCTGCGCGCGCCGCCCCTGG
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Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MFKSLRTLAFATLLPFALPTLAQVNATLPANVQKALQTNKLTGNDLSLVLIPLDGPGNPTYYNADVSVNPASTMKLFTTYAALEMLGPTYQWKTEFYTDG QLKNGVLNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTKVTGDLVLDRSYFNIPLPVFNDDGGDDTKPFLVGPDSLLVNLKSVRMVVRTDGNKVNVQMD PPLANVRIDNQVKMTAPATCPAWPKLRFSPVTQFDGTTLLATGQIPQGCSAQTYMSLLDHPGYTAGAVRGIWQELGGSILGKDRQGSVPRNATLIAKAFS PDLVEIIRDINKYSNNTMARQLFLSIGAQFRNSADGDDAQAAQRVVRQWLARKGITAPRLVMENGSGLSRQERVSAREMAAMLQAAWHSPYAAEYISSLP LAGLDGTMRKRLRRTALVGEAHVKTGTLNTVRALAGFSRDASGHNWVVVAILNSPRPWGASAILDQVLLSLHARK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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