Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTGAGAAGGCCACGGCAGGCGCCGAGGGTATCGAGCTGGCGCTGCGTAATACCGCCAATGGCGAACTGAGCGTGCAGCGCTACGACCTGGTAATCCTCG CCACCGGTTATGAGCGGCAGTTGCATCGTCAACTGCTGGAGCCGATGGCCGACTACCTCGGGGACTTCGAGGTCGACCGCAACTATCGTCTGATCACCGA CCAGCGTTGCCAGGCGTCGATCTACATGCAGGGCTTCTGCCAGGCCAGCCATGGCCTCAGCGACACCCTGCTGTCGGTGCTGCCGGTACGTGCCGAGGAA ATCTCCGGCTCCCTGTACCAGCACCTGAAGCCCGGTACTGCGGCCCGCGCCCTGCACGAGCACGCCCTGGCCAGCTGACCGGCGCCACGCCGCCACGCCC TGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCGTTTTCGTTGCATGTCCCGGCCGTTCCGGCCACCACTTTGCAGAGAAACGACATCG
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DNA Sequence for Gene |
>NQ09_RS26935
ATGGGGATGCGTACCGTACTGACCGGCCTGGCCGGCATGCTGTTGGGTTCGATGATGCCGGTCCAGGCCGATATGCCGCGGCCGACCGGGCTGGCCGCGG ACATCCGCTGGACCGCCTATGGCGTGCCGCACATCCGGGCCAAGGATGAGCGCGGCCTGGGCTATGGCATCGGCTACGCCTACGCGCGCGACAACGCCTG CCTGCTGGCCGAGGAGATCGTCACCGCGCGCGGCGAGCGGGCGCGCTATTTCGGCAGCGAGGGCAAGTCGTCGGCCGAGCTGGACAACCTGCCGTCCGAC ATCTTCTACGCCTGGCTCAACCAACCCGAGGCGCTGCAAGCCTTCTGGCAGGCGCAGACGCCCGCGGTACGCCAGTTGCTCGAAGGCTACGCCGCCGGTT TCAACCGCTTCCTCCGCGAGGCCGACGGCAAGACCACCAGTTGCCTTGGCCAGCCCTGGCTGCGGGCCATCGCGACCGATGACCTGCTGCGCCTGACCCG GCGCCTGCTGGTCGAAGGCGGGGTCGGCCAGTTCGCCGACGCGCTGGTGGCCGCCGCGCCGCCCGGCACGGAGAAGGTCGCCCTGAGCGGCGAGCAGGCG TTCCAGGTCGCCGAGCAGCGGCGCCAGCGCTTCCGCCTGGAGCGCGGCAGCAACGCCATTGCCGTTGGCAGCGAACGTTCGGCGGACGGCAAGGGCATGC TCCTGGCCAACCCGCACTTCCCCTGGAACGGCGCGATGCGTTTCTACCAGATGCACCTGACCATTCCCGGCCGGCTCGACGTGATGGGGGCCTCGCTGCC CGGTCTGCCGGTGGTCAACATCGGCTTCAGCCGCCACCTGGCCTGGACCCACACGGTGGATACCTCCAGCCACTTCACCCTGTATCGCCTGGCGCTGGAC CCGAAGGACCCGCGGCGCTACCTGGTCGACGGTCGTTCGCTGCCGCTGGAGGAGAAGTCCGTCGCGATCGAGGTGCGCGGCGCCGACGGCAAGCTGTCGC GCGTCGAGCACAAGGTCTACCAGTCGATCTACGGCCCGCTGGTGGTCTGGCCCGGCAAGCTGGACTGGAACCGCAGCGAGGCCTATGCGCTGCGTGACGC CAACCTGGAGAACACCCGGGTACTGCAACAGTGGTACTCGATCAACCAGGCCAGCGACGTCGCCGACCTGCGCCGGCGCGTCGAGGCGCTACAGGGGATC CCCTGGGTCAACACCCTGGCTGCGGACGAGCAGGGCAACGCCCTGTACATGAACCAGTCGGTGGTGCCCTACCTGAAGCCGGAACTGATTCCCGCCTGCG CCATTCCGCAACTGGTCGCCGAAGGCCTGCCGGCCCTCCAGGGGCAGGACAGCCGCTGTGCCTGGAGCCGCGACCCGGCCGCGGCCCAGGCTGGCATCAC CCCGGCGGCGCAACTGCCGGTGCTGTTGCGCAGGGACTTCGTGCAGAACTCCAACGACAGCGCCTGGCTGACCAACCCGGCGAGCCCGTTGCAGGGCTTT TCGCCCCTGGTCAGCCAGGAGAAACCCATCGGTCCGCGGGCGCGCTACGCCCTGAGCCGGCTACAGGGCAAGCAGCCGCTGGAGGCGAAGACGCTCGAGG AAATGGTCACCGCCAACCATGTCTTCAGCGCCGACCAGGTGCTGCCGGACCTGCTCCGCCTGTGCCGCGACAACCAGGGCGAGAAGTCCCTTGCCCGCGC CTGCGCGGCCCTGGCGCAGTGGGACCGTGGCGCCAACCTCGACAGCGGCAGCGGTTTCGTCTACTTCCAGCGCTTCATGCAACGCTTCGCCGAACTCGAC GGCGCGTGGAAGGAACCGTTCGATGCGCAACGTCCCCTGGATACGCCGCAAGGCATCGCCCTCGACCGGCCGCAGGTGGCGACCCAGGTGCGCCAGGCGC TGGCGGACGCGGCGGCGGAGGTGGAGAAGAGCGGGATTCCCGACGGCGCGCGCTGGGGCGACCTGCAAGTGAGCACCCGTGGCCAGGAACGCATCGCGAT TCCCGGCGGCGATGGCCATTTCGGGGTCTACAACGCGATCCAGAGCGTCCGCAAGGGCGACCACCTGGAGGTGGTCGGCGGCACCAGCTACATCCAGCTG GTGACCTTCCCCGAGGAAGGGCCCAAGGCTCGCGGGTTGCTGGCTTTCTCCCAGTCCAGCGATCCGCGCTCGCCGCACTACCGCGACCAGACCGAGCTGT TTTCCCGCCAGCAATGGCAGACCTTGCCGTTCAGCGACAGGCAGATCGACGCCGACCCGCAACTGCAACGGCTAAGCATTCGCGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAAGCAATGCCTATCAGATCTGATGGGAAAAAAACTGACGGTTTTTCCGCGCTCGTTCGTCTTTAACCATAGAGGCGGCCCACAGCCGCCCGGTTCCAGG GAACACGTGCAGGCAGCGAGCAGGGATGCTCGGCTTCGGCGGGGACCCGCTACCCACTCGTCCACGAAAGGAGCGTCACGATGACCCATTCGCCCGTCAA ACAGATGTTGAAGGAGGCCGGCCTGAAGATGAGCCTGGCCCGGCTGAAAGTGATCGATGCGCTCTGGGAAGCCTCGGGGGAGCAGGGCCGGGTGCCGATC CGCACCCTGCACCGGCGTCTCTCCGAAACCGGTACGCCGCTGTCCCTGGTGAGCATCCGCCAGGTCCTCGGGCGCCTGGTGGAAAGCGGCCTGGTGACCC TCGACGAACAGGATGTCTACAGCCCCGGCAAGGCTTCCTGGGGCGGTGCCGCCGGTTCCGCGGCGCCCGAGCGCCGCGCCGCGGCCAACGAGCAGCGGCT
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Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSD IFYAWLNQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGTEKVALSGEQA FQVAEQRRQRFRLERGSNAIAVGSERSADGKGMLLANPHFPWNGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALD PKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGI PWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPALQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRRDFVQNSNDSAWLTNPASPLQGF SPLVSQEKPIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAELD GAWKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGHFGVYNAIQSVRKGDHLEVVGGTSYIQL VTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQTLPFSDRQIDADPQLQRLSIRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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