Pseudomonas aeruginosa AZPAE12148, NQ09_RS26625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGCGATCTTCAAGCCGATCTACGAGCAACTCGACCACAATTATCTGAACGATATTCCAGGCCTGGAAAACCCCACCAGCGAAAACCTCTGCCGCTGG ATCTGGCAACAACTCAAGCCGCTGTTGCCGGAACTCTCCAAGGTCCGCGTCCACGAAACTTGCACCAGCGGTTGCGAATATCGGGGCGATTGATTCGCCC GACTCTCCCCAGGCGCTTCGCCATCTGCTCTAAAACGGGCTTCCACACAACGGGCCCGTTCTGCCGTCTCTCTCCCATGGGCTGTACGAAGCATTATCCC CACGGACATAAAGGTTTCATATTCTTCAGGGAAACATCCGGCAAGCTGTCCCTACAGTCCGTTAGTCAATAAAACCGTGCAACTATATTGTTCTTCCAGT AGATAAAGACTTATCCTTTGCCGCGGACACGGAAAGTCCGTAAATCCACTATAAATGCACCAAAACCCAGCACCATATTTTTAGAACGGGAGTGAAACGA
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| DNA Sequence for Gene |
>NQ09_RS26625
ATGTCCAAACTTGCCGAGTTCCGCGAGGCAGAGCGCAAACTTCAGGAGCAACTGGCCCTGCTGGAAAAGCTGAAAAGCGACAGCAGCCTGAAGCAGGAAC TGGAATTCAAGGACAAGTTGCAGGCGTTGATGGACAAGTACGGCATGACCCTGCACAACATCATCGCCATCCTCGACCCCAAGGCTCCGGTCACCGTCAG CGCCGCTCCGCAGCGCCGTGCCCGCGCCCTGAAGGTCTACAAGAACCCGAACAACGGTGAAGTCGTCGAAACCAAGGGCGGCAACCACAAGGTTCTGAAA GCCTGGAAAGAACAGTACGGTTCCGAAACCGTCGAATCCTGGCTGCAACGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGGTTTTCCCGACGGCATCCTGCCGATGCCGTCGGAAACCCCACTGGCTACTTTCGCTCCCCTCCTCGCCAGATCAATTCTGCGACTTCGATTCGCAA GCGCTCCTGATCTTCTGCGCCGCCAGGTTGTTCTCCACCCCCGGCAGGTTCTCCAGCAGACACTCGTAATAAGCCTTTTCCCGCGACAGCAGGAAGGAGC CGTCGTTATACAACTTGTCGCAGGCCTGGGTGATGAAGTGAACCGCCACCCCGCTCTTCGCCGTGCGTTGGTAGTCGAGTATGCATTGGTCGTAGTCCTT GTCGTCGGCGAGAGTGGAAAGCGGAAATAACAGCAGCAGGGGCAGCAGGAACTTCATGGCAATGGTATCCATGGGAAAGTTGTGCTCCAGCATGGACGAG CCGGCTCGGAGTGCCAAGCCGACCATGAAGTAAAATTTTGCACTTGTTTACAGGCCGGACCAGACTGGCCGTTCTTCGCTGCGCGAATGCGACAATGGCG
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| Amino Acid Sequence |
>transcriptional regulator
MSKLAEFREAERKLQEQLALLEKLKSDSSLKQELEFKDKLQALMDKYGMTLHNIIAILDPKAPVTVSAAPQRRARALKVYKNPNNGEVVETKGGNHKVLK AWKEQYGSETVESWLQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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