Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCGTGGACGGCGGCGGGCACCTCACCTACCTGGCGCCGACCCGCGTCAACCTCAGCCTGATGGAAGAACGCTGGCCGGACATCCGTTTCCGCGCGACG CGCGAGCATCACTGATCGCACGGGAGGAGCCAGGGACAGCCTCCCTGGCTCCTCCCGCGGCGGTCTCGGCGCAGGGCGGATAACCCTATCGCTGCTATCC GTCGCTCCAGCGCGATATCGGCGGACAACCCCTGCGCAGGCAAAGCGAACGCGACGCTGCGCGAAACGCCTCCTTCCCTCCTCCCAGGCTCCCCCTCCCC GTCGCGCCATCGCTCCGTACGCCTGCGCCTTTCACAGGCGGGTGACGAGACTTCCAGGTAGGAAATCCCTTCAAGCGCAACCAGGCAAGGACGCGGTTGC CCAAGCCGTTTCCGAAGGTGCCTCCTGAGCAGTTCAGATAGGTTGTCCGACCCCGAGTGGCACGGCAGAGTGCCAGGGTTTATCTCATAGGGACTTGAGC
|
|
DNA Sequence for Gene |
>NQ09_RS21435
ATGAGCGGCAAACCCGCTGCGCGCCTGGGCGATCCGACCGCGTGTCCGCTACCGGGCCACGGCAGCAACCCGATCGTCGGCGGCTCGCCCGACGTCTTCT TCGACCATCTGTCCGCTGCCCGCCAGGGCGACGCCACCGCCTGCGGCGCCACCCTCAGCGCCAACGTCATCGCCAACGTACTGATCAACGGCAAGCCCGC CACCGTGGTAGGTAGCGTCGGCACCCACGGCAACCTGGTGGTCGGCGGGGCGGGCACGGTGCTGATCGGCAACAGCGGCGGCGGCGCACCCGCTCTCGCC CTCGCCCCACCGAAGCTGTGCCTGCAATGCCTGCTGCTGGCGGCACGCCGCAACCAGGCCCTGGTGCCCCTGGAAAGCCTCGGCGGCGCACCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGGCTCCAGCCGGCGCTCGCGGCGCCTACGCCGGACAGCCGCCTGTTCGCCCTGGCGGACGGCGCCCGCTACCTGACCCTGGACACCCGCCTGGAAAA GGCCGCGGGGGAAATCCGCTCGCGCTGGCTGCTGGCCGGGAGCGAGCTGGACGAAATCGCCCATGCCGGGCCGGTCCTGATCGAATTCATGGACAGCGCC CCGCTTTCGTCATCGGGCGAGTTCCTCGGCTGGCTGCGCGACTGGGACCGCCGCTCGCCCATGGCCTCCTGGCTGTGGAGCCGGGCGTCCTTCGAAAACC TCGCGAAACACTTCGCCGGGCTGCTCTTCACCCGCATGCCCGACGGCCGCCGGGCGCTGTTGCGCTACTACAGCCCGGAAGTGCGCCGGGCGCTGGAACA GGTCATGACCGCGCGGCAATGGACGCAAGTGATGGCGCCGCTGGAGCGTTGGCAGGTCTGGCAGCCCCTGCAGGGCGGCTATCTCGTCTATGACCGGGAA
|
|
Amino Acid Sequence |
>hypothetical protein
MSGKPAARLGDPTACPLPGHGSNPIVGGSPDVFFDHLSAARQGDATACGATLSANVIANVLINGKPATVVGSVGTHGNLVVGGAGTVLIGNSGGGAPALA LAPPKLCLQCLLLAARRNQALVPLESLGGAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|