Strain | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAGGCTGGCCATGCGCCCGCCCATCGACTTGCCGCCCAGGGCCAAGGGCCCGTCCAGGGTCTCGCGGACCTGCGCATGGACTCGCCGCCAGCAGTCGAG CAACTGCGCCTGCGGATTCGGCGGACGCTTGCGGCCGTCCTCGCGGCGCTGGGCCATGTAGGGAAACTCGAAGCGCGCGACGGCGATGCCCTGGGCGGCG AGCAGTTCGGCGATGCGCTCCATGAACGGGCTGTCCATCGGCGCCCCGGCGCCATGGGCGAGAATCAGGGTGGCCGACAGCGAGCCGGCCGGGCGGTTCC ATTTCAGCGACAACTTGCCACACCTCGTATGCAGTGGGGGTCGGGAAGCCAATTGATCCCGATCAATATTTCATAACGCCCCATTATCCATGCTTCCTCT CGCTAATTACGCCAATTAGACCAGCCCCAATGGGGGGACGCCCGGCATCCCAACTGCCGGAAAAAGCCATAGCGTATAACCGTGGATGGAAGCCCATAGC
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DNA Sequence for Gene |
>NQ09_RS14655
ATGAGCACCACTAACCCAGAGTCCGCCTATAACTACAAGGTGGTCCGCCAATTCGCCATCATGACCGTGGTCTGGGGCATCGTCGGCATGACCGTCGGTG TCCTGATCGCCGCCCAGCTGGTATGGCCCGACCTGAACTTCGGCTTGCCGTGGACGAGCTTCGGCCGCCTGCGCCCGCTGCACACCAACGCGGTGATCTT CGCCTTCGGCGGTTGCGCACTGTTCGCCACCAGCTACTACGCGGTGCAGCGCACCTGCCAGGTGCGACTGTTCTCCGACACCCTCGCCTCCTTCACCTTC TGGGGCTGGCAACTGGTGATCCTGCTGGCCGCCATCAGCCTGCCGCTGGGCTACACCTCGTCCAAGGAGTACGCCGAGCTGGAATGGCCGATCGACATCC TGATCACGGTGGTCTGGGTCGCCTACGCGGTGGTGTTCTTCGGCACCCTGGTCAAGCGCAAGGTCAAGCACATCTATGTGGGCAACTGGTTCTTCGGCGG GTTCATCCTCACCGTCGCCATGCTCCACGTGGTGAACAACCTCGAGCTGCCGGTGACCTTCACCAAGTCCTACTCGCTGTACGCCGGCGCCACCGACGCC ATGGTCCAGTGGTGGTACGGGCACAACGCCGTGGGCTTCTTCCTCACCGCCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGGCCGAGCGTC CGGTCTACTCCTACCGCCTGTCCATCGTCCACTTCTGGGCGCTGATCGCGGTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCGCCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCGGGCGCCTGGCAT AAGCTGCGCAGCGACCCGATCCTGCGCTTCCTGGTGGTGTCCCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCAAGACCGTCA ACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTACACGCCGGCGCCCTCGGCTGGGTCGCGATGGTTTCCATCGGCTCGCTCTACCACCTGAT CCCGAAGGTCTTCGGCCGCGAGAAGATGTACAGCCTGGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGTACCGTGCTTTACATCGCCTCGATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGCGCGGTCAACGAGGACGGCACCCTGACCTACTCCTTCGTCGAAGCGCTGGCCGCCGGCCACCCCG GCTTCATCGTGCGCATGCTCGGCGGTTTCATCTTCCTGCTCGGCATGTTCCTGATGGCCTACAACACCTGGCGCACCGTCAGTGCCGCCAAGCCGGCCGA ATACGAAGCCGCCGCACAGATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCCGAGCATGAAACACGAAATACTCGAGAAGAACGTCGGCCTGCTGGCGCTATGCATGGCCGTGGCCGTGAGCATCGGCGGCCTGACCCAGATCGTG CCGCTGTTCTTCCAGGACGTGACCAACACCCCGGTCGAAGGCATGAAGCCCTATACCGCGCTGCAACTGGAAGGCCGCGACATCTATATCCGCGAAGGCT GCGTCGGCTGCCACTCGCAGATGATCCGTCCGTTCCGCGCCGAAACCGAACGCTACGGCCACTACTCGGTGGCCGGCGAGAGCGTCTGGGACCACCCCTT CCTGTGGGGTTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGTAGCCGCTACTCCGACGACTGGCACCGCGCGCACCTGTTCAACCCGCGCAACGTG GTGCCCGAGTCGAAGATGCCGGCCTACCCGTGGCTGGTGGAGAACAAGCTCGACGGCAAGGACATCGAGAAGAAGCTCGAAGTGATGCGCACCCTCGGCG
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Amino Acid Sequence |
>cytochrome oxidase subunit I
MSTTNPESAYNYKVVRQFAIMTVVWGIVGMTVGVLIAAQLVWPDLNFGLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYAVQRTCQVRLFSDTLASFTF WGWQLVILLAAISLPLGYTSSKEYAELEWPIDILITVVWVAYAVVFFGTLVKRKVKHIYVGNWFFGGFILTVAMLHVVNNLELPVTFTKSYSLYAGATDA MVQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALIAVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWH KLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGSLYHLIPKVFGREKMYSLGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNEDGTLTYSFVEALAAGHPGFIVRMLGGFIFLLGMFLMAYNTWRTVSAAKPAEYEAAAQIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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