Pseudomonas aeruginosa AZPAE12151, NQ12_RS29075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12151 AZPAE12151_contig_57, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGGCAGCCCCGAAGGCGAGCTGGCGGTGGCCCAGGCCATCGTCTACCTGGCCTGTGCGCCGAAGAGCAATGCGGTGTACAGCGCGTTCAACGCGGCG ATGCGCGACGTCGCCGAAAGCGGCTCGCGGGAAGTGCCATTGCACTTGCGCAACGCGCCGACCAAATTGATGAAGAGCCTTGGCTATGGCGAGGAATACC GCTACGCCCACGACGAGCCGGATGCCTATGCCGCCGGAGAGGATTATTTCCCCGAGGATCTGGAGCCGCGGCGTTACTATCAACCGGTGCCGAGGGGCCT GGAACTGAAGATCCGCGACAAGCTGGAACACCTGGCCGAGCTGGATCGCACCAGTCCCCGCCAACGCAGAAAATCCTGAGCGGTATGGGCTCGGCGGAGC TAGCCAGGCTTCCGCGACGGCGTCGATGACGTCGCCGGGGCCGGCGAAGCGCCAACCGGGCCACGAACCGCCGATAACCGACACGAGACGAGAAAAGAGC
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| DNA Sequence for Gene |
>NQ12_RS29075
ATGCTCGATCCCAAACTGGTACGCACCCAGCCGCAAGAAGTGGCTGCCCGCCTGGCCACCCGTGGCTTCCAACTGGATGTCGCACGCATCGAAGCGCTGG AAGAGCAGCGCAAGTCGGTACAGACCCGTACCGAGCAGCTGCAAGCCGAGCGCAACGCGCGTTCCAAGGCGATCGGCCAGGCCAAGCAGCGTGGCGAGGA CATCGCGCCGCTGCTGGCCGATGTCGATCGCATGGGCTCCGAGCTGGAGGAAGGCAAGCGCCAGTTGGACGCCATCCAGGGCGAACTGGATGCCATGCTG CTGGGCATTCCCAACCTGCCGCACGAGTCGGTGCCGGTCGGTGCCGACGAGGACGCCAACGTCGAAGTGCGTCGCTGGGGCACGCCGAAGACCTTCGATT TCGAGGTCAAGGACCATGTCGCCCTCGGTGAACGGCACGGCTGGCTGGATTTCGAGACCGCTGCCAAGCTTTCCGGCGCGCGCTTCGCCCTCATGCGCGG CCCGATCGCCCGCCTGCATCGCGCCCTGGCGCAGTTCATGATCAACCTGCATACCGCCGAGCATGGCTACGAGGAGGCCTACACCCCCTATCTCGTCCAG GCTCCGGCGCTGCAAGGCACCGGCCAGTTGCCGAAGTTCGAGGAGGACCTGTTCAAGATCGGCCGCGACGGCGAAGCTGACCTCTACCTGATCCCGACCG CCGAGGTTTCGCTGACCAACATCGTCTCCGGGCAGATCCTCGACGCCAAGCAATTGCCGCTGAAGTTCGTCGCCCATACCCCGTGCTTCCGCAGCGAGGC CGGTGCCTCCGGGCGCGATACCCGCGGCATGATCCGTCAGCATCAGTTCGACAAGGTGGAGATGGTGCAGATCGTCGATCCGGCCACTTCCTACGAGGCG CTGGAAGGCCTGACCGCCAACGCCGAGCGCGTCCTGCAACTGCTCGAGTTGCCGTATCGGGTGCTGGCGCTGTGCACCGGCGACATGGGCTTCGGTGCGA CCAAGACCTACGACCTGGAAGTCTGGGTTCCCAGCCAGGACAAGTACCGCGAGATTTCCTCCTGCTCCAACTGCGGCGACTTCCAGGCCCGGCGCATGCA GGCCCGCTACCGCAATCCGGAAACCGGCAAGCCCGAGCTGGTGCACACCCTCAACGGCTCCGGCCTGGCCGTCGGCCGCACCTTGGTGGCGGTACTGGAG AACTACCAGCAGGCGGACGGCTCGATCCGTGTGCCGGAAGTCCTCAAGCCCTACATGGCTGGCATCGAGGTGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATGGATTTCCTGCCGCTGTTCCACTCCTTGCAAGGGCGCCTCGCGCTGGTGGTCGGTGGCGGCGAAGTCGCCCTGCGCAAGGCGCGCCTGCTGGCCGAC GCCGGCGCGCGCCTGCGCGTGGTCGCGCCGCAGATCCACATCGAACTGCGGCATCTGGTGGAGCAGGGCGGCGGCGAGCTGCTCGAACGCGACTACCAGG ACGGCGACCAGCCCGGCTGCGCCCTGATCATCGCCGCCACCGACGACGAACCGCTGAACGCCGAGGTGTCGCGAGCGGCCAATGCGCGCGGGATACCGGT CAACGTGGTGGACGCGCCGGCCCTGTGCAGCGTGATCTTCCCGGCCATCGTCGACCGTTCGCCGCTGGTGGTGGCGGTCTCCAGCGGCGGCGATGCGCCC GTGCTGGCGCGGCTGATCCGGGCCAAGCTGGAAACCTGGATTCCCTCGACCTACGGGCAACTGGCCGGACTCGCCAGCCGCTTCCGCCACCGGGTCAAGG
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| Amino Acid Sequence |
>seryl-tRNA synthetase
MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQAKQRGEDIAPLLADVDRMGSELEEGKRQLDAIQGELDAML LGIPNLPHESVPVGADEDANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQFMINLHTAEHGYEEAYTPYLVQ APALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSLTNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSYEA LEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMAGIEVIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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