Strain | Pseudomonas aeruginosa strain AZPAE12151 AZPAE12151_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGCTTCGGCGGGCTGCGCAGCGAGGCAGGCAGCGACGAGGACTGGCTGCGGGCGATGGTCTCGCTGTTCTTCGACTACCACCTGGCGGTCGGTCCGAT CATCCGCATGATGCAGGAGGAGGCCCTGCATGCCGGCTCGCCGCTGGCGGCGCACCGGCAGCGCGCGCACCTGAAGATTATCGAGCTGTGGGCCGAGCGC CTGGGCGCCCAGGGCGCGGCCCACGATGCGCTGACCTACCGGGTGCTGATCTGGGCGATGGAGGCGGCTTCGCTGGAGCTGCTCAATGCCAGCGACCCGC TGGAGCTGCCGCGGGTCAAGCGGGTGCTCGGCGACCTGCTGGTGGGTACGCTCTGTCCCCGCACCCAGGCTCCGACGAGATTGCAAGGGTAACAGCCGGG CAGTCGCCGCTCGCGCCTACAGAACCTAGGTTGGGCTCGCAGCCCGCCGTGGCCATGCTCTGATGCCCTGTCATAACAACAAGACGGGAGACGTGCGTCC
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DNA Sequence for Gene |
>NQ12_RS06590
ATGTCCGCGACACCCTATCTGCTGCAACCGCCGCTGGCGGTCGGATTCGCCCGCCTGGGCTTCGGCTCCCTCTCGCTGGAGTCGTTGCGCGAGCGCTACG CCGCACCGTCCAGCGGCTCGCGCTTCATCGAGCTGGACGGTTTCCCGCTGCACTACCGCGACGAAGGCAGCCGCGACAAGCCGGTACTGGTGATGATCCA CGGCGTGGTCGCCTCGCTGCACACCTGGGACGACTGGGTGAAGGCGATGTCGCCCTACTTCCGCATCGTGCGCTTCGACGTGCCGGGCTTCGGCCTGACC GGGCCGGGGCGTGACAGCCGTTACTCCGGCGAGCGCATGGTGGCGATCCTCGGCCAGTTGCTCGATTTCCTGAAGATCGACAAGGCCTCGATCGCCGGCA ACTCCCTGGGCGGTTATATCGCCTGGAACTTCGCCCTGGCGCAGCCGCAGCGAGTGGAGCGGCTGGTGCTGATCGACCCGGCCGGTTACCAGATGCGCAA GGTGCCGTGGATGATCGCCTCGGCGGCGCTGCCCGGCTCGACCCTGGCGATGCCGCTGTGGATGCCGCGGGCGCTGATCGCCCAGGGCATCAAGGAAGTC TATGGCGAGCCGGGGCGGATCAAGCCGGGGGTGGTCGACCGTTACTACGACCTGAGCCGCCGCCCGGGCAACCGCAAGGGCATGATGGAGATCTTCCGCG TGTTGCTGAAGGTCAACCGCGAGGAACTCGGCACCTCCGGCGAACGCATCGCCCGGATCGTCGCGCCGACCCTGCTGATGTGGGGCGAACGCGACCGCTG GATCTCGCCGAAGCACGTACCGCTGTGGCAACGCGACCTGCCGGGGATCCAGGTGAAGACCTATCCGGGCGTCGGGCATATCCCCATGGAGGAGATTCCC GAGCAGACCGCGGCGGATGCACTGCGCTTCCTGATGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCAGGCCTTCATGAAGAAGCCCGCGCTGGTCAGTCGCGGGCTTTTTAATGCGTGGACGAAAGGCCGAAATACCAGGCAGGGCAGGGAAGCGATGCATG CCCCTCTCGCGGCGCGGAGGGGCGGCGAGGAGGGTCAGGCGGCCTTCGGTTCCGGTTCGAACTGGTCGCGGTACTGCTCGATGAGGTGCAGGTTATTGTG CTGCCAGGGGTGGAAGTCCTTCTTGTAGAAGTCCAGGTACACGCCCACCAGCGAGCGGAACACGCCGTCCTTGCCCCACAGCCACTTGATGCCGTCGCGC CAGACCTTGAAGTTCCACAGCAGGCCGTCGCGCTTGAGCATGTGGACCAGGCCCTTGGTGGTGTCGAGGGCGAAGAAGAAGGTGCCCTGGACCATCGCCC GGCGGCGCAGCCTGGCCTTGCCGTTGACCAGCATGAACACGTCGTAGGCCACCGCCTTGTGCTCGGTTTCCTCCAGTGCGTGCCAGCGCCACAGGCGGGC
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Amino Acid Sequence |
>alpha/beta hydrolase
MSATPYLLQPPLAVGFARLGFGSLSLESLRERYAAPSSGSRFIELDGFPLHYRDEGSRDKPVLVMIHGVVASLHTWDDWVKAMSPYFRIVRFDVPGFGLT GPGRDSRYSGERMVAILGQLLDFLKIDKASIAGNSLGGYIAWNFALAQPQRVERLVLIDPAGYQMRKVPWMIASAALPGSTLAMPLWMPRALIAQGIKEV YGEPGRIKPGVVDRYYDLSRRPGNRKGMMEIFRVLLKVNREELGTSGERIARIVAPTLLMWGERDRWISPKHVPLWQRDLPGIQVKTYPGVGHIPMEEIP EQTAADALRFLMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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