Strain | Pseudomonas aeruginosa strain AZPAE12151 AZPAE12151_contig_37, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
|
|
DNA Sequence for Gene |
>NQ12_RS26310
TACCGACCCGGCCGGCAACAGCAGCACCCCGGTCACCGCCGAAGCCCCCGACTTCCCCGACGCGCCCCAGGTCAATGCCAGCAACGGCAGCGTCCTCAGT GGTACGGCGGAAGCGGGCGTGACCATCGTGATCACCGACGGCAACGGCAATCCGATCGGCCAGACCAGCGCCGATGCCAACGGCAACTGGAGCTTCACCC CCGGTAGCCAACTGCCGGATGGCACCGTGGTCAATGTGGTGGCCAGGGACGCCGCCGGCAACAGCAGCCCGGCGACCTCCATCACCGTCGACGGCGTGGC GCCGAGCGCGCCGGTGGTCGAGCCGAGCAACGGCAGCGAACTCAGCGGGACTGCCGAACCGGGCAGCAGCGTGACCCTGACCGACGGCAATGGCAATCCG ATCGGCCAGACCACCGCCGATGCCAACGGCAACTGGTCTTTCACGCCGTCCACCCCGCTGCCGGACGGTACCGTGGTCAACGTGGTGGCCAGGGATGCCG CCGGCAACAGCAGTCCGCCGGCCAGCGTTACCGTGGATGCCGTCGCGCCGGCCACGCCCACCGTCGATCCGAGCAACGGTACGACCCTCAGCGGCACCGC CGAGCCGGGCGCTACCGTGACCCTGACCGACGGCAACGGCAATCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGACCTTCACCCCGAGCACG CCGTTGCCCAACGGCACGGTGGTCAACGCCACGGCTACCGACCCGTCCGGCAACGCCAGTTCGCCGGCCAGCGTCACCGTGGACGCCGTGGCACCGGCCA CGCCAGTGGTCAACCCGAGCAACGGCACCACGCTCAGCGGTACCGCCGAGCCGGGCGCTACCGTGACCCTGACCGACGGCAACGGCAACCCGATAGGGCA GGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACTCCGACCACGCCGTTGCCCAACGGCACCGTGGTCAACGCCACGGCCACCGACGCCTCCGGCAAC ACCAGTGCGGGCAGCAGTGTCACCGTGGACTCGGTAGCCCCGGCCACGCCAGTGATCAACCCCAGCAACGGCACCACGCTCAGCGGCACCGCCGAGCCGG GCAGCAGCGTGACTCTGACCGATGGCAACGGCAACCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACCCCGTCCACGCCGCTGGC GGATGGAACCGTGGTCAACGCCACGGCCACCGATCCGGCGGGCAACACCAGCGGCCAGGGCAGCACCACCGTCGATGGCGTGGCGCCGACCACGCCGACC GTCAACCTGAGCAACGGCAGCAGCCTCAGCGGCACTGCGGAACCGGGCAGCACGGTGATCCTCACCGACGGCAACGGCAATCCGATCGCCGAGGTCACCG CCGACGGCAGCGGCAACTGGACCTACACCCCGTCCACGCCGATCGCCAACGGCACCGTGGTCAACGTGGTGGCCCAGGACGCCGCCGGCAATAGCAGCCC GGGCGCCAGCGTCACCGTGGACTCGCAGGCCCCGGCGGCTCCGGTGGTCAACCCGAGCAACGGCACTACGCTCAGCGGCACCGCCGAGCCGGGCGCTACC GTGACCCTGACCGACGGCAACGGCAACCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGAGCTTCACACCGGGCACGCCGCTGGCCAACGGCA CCGTGGTCAACGCCACGGCCAGCGACCCGACCGGCAATACCAGCGCTCCGGCCAGCACCACCGTGGACTCGGTGGCGCCGGCCGCGCCGGTGGTCAATCC GAGCAACGGCGCGGAGATCAGCGGCACCGCCGAACCGGGCGCCACCGTGACCCTGACCGATGGCAGCGGCAATCCGATCGGGCAGGTCACCGCCGACGGC AGCGGCAACTGGAGCTTCACGCCGTCCACGCCGCTGGCGGATGGAACCGTGGTCAACGCCACCGCTACCGACCCGGCCGGCAATACCGGCGGCCAGGGCA GCACTACCGTGGACGCCATCGCGCCGGCCACGCCGACCGTCAACCTGAGCAATGGCAGCAGCCTCAGCGGCACTGCGGAACCGGGCAGCACGGTGATTCT CACCGACGGCAACGGCAATCCGATCGCCGAGGTCACCGCCGACGGCAGCGGCAACTGGACCTACACCCCGTCCACGCCGATCGCCAACGGTACTGTGGTC AACGTGGTGGCCCAGGACGCCGCCGGTAACAGCAGCCCGCCGGCGACGGTGACCATCGATTCCAGCGCGCCGCCGGCGCCGGTGATCAACCCGAGCAACG GCGTCGTCATCAGCGGCACCGCCGAGGCCGGTACCACCGTGACCCTCACCGATGCCGGCGGCAACCCGATAGGGCAGGTCACCGCCGACGGCAGCGGCAA CTGGAGCTTCACGCCGGGCACGCCGCTGGCCAACGGCACGGTGATCGTCGCCACGGCCACCGACCCGACCGGCAATACCGGCCCGCAGGCCGCCACCACG GTGGACGCGGTGGCGCCGCCGGCGCCGGTGATCGATCCGAGCAACGGCACGACCATCAGCGGCACCGCGGAGGCCGGGGCCAAGGTGATCCTCACCGACG GCAACGGCAACCCGATCGGCGAAACCACCGCCGACGGCAGCGGCAACTGGACCTTCACGCCCGCCACGCCGCTGGCCAACGGCACGGTGGTCAACGCCGT GGCCCAGGACCCTGCGGGCAATACCGGCCCGCAGGGCAGCACTACCGTGGACGCGGTGGCGCCGAACACGCCTGTGGTCAATCCGAGCAACGGCAACCTG CTCAACGGTACCGCCGAGCCGGGCAGCACCGTGACCTTGACCGACGGCAACGGCAACCCGATCGGCCAGACCACCGCCGATGGCAGCGGCAACTGGAGCT TCACGCCCGGCTCGCAACTACCCAACGGCACCGTGGTCAACGTGACCGCGAGCGACGCCGCCGGCAATACCAGCGCTCCCGCTACCACGACGGTGGATTC CTCGCTGCCGTCGATCCCGCAGGTGGATCCGAGCAACGGTTCGGTGATCAGCGGCACCGCGGACGCCGGCAACACCATCATCATCACCGATGGCAACGGC AACCCGATTGGCCAGGTCACCGCCGACGGCAGCGGCAACTGGTCCTTCACTCCAGGCATCCCGCTGCCGGATGGCACGGTGGTCAACGTGGTGGCGCGCA GCCCAAGCAATGTCGACAGTGCGCCGGCGGTGATCACGGTGGATGGCGTGGCCCCGGCGGCGCCGGTGATCGATCCGAGCAACGGCACCGAGATAAGCGG TACCGCGGAGGCTGGCGCGACGGTGATCCTCACCGATGGCGGAGGCAACCCGATTGGCCAGGCTACCGCCGACGGCAGCGGCAACTGGACGTTCACCCCG GGCACCCCGCTGGCCAACGGCACCGTGATCAACGCCGTGGCCCAGGACCCGGCCGGCAACACCAGCGGTCCGGCCAGCGTCACCGTCGATGCCATCGCCC CGCCGGCGCCGGTGATCGATCCGAGCAACGGAGTCGTCATCAGCGGTACGGCGGAAGCCGGGGCCACGGTGATCCTCACCGACGGCAACGGCAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCA ACTGGAGCTTCACGCCCGGCACGCCGCTGGCCAATGGTTCGGTGATCAATGCGCTGGCCCAGGACGCCGCCGGCAACACCAGCGGCCCGGCCAGCACCAC GGTGGACTCGGTAGCCCCGGCCACCCCGGTGCTCGATCCGAGCAACGGTACGGTGATCAGCGGTACCGCCGAAGCCGGGGCCACGGTGATCCTCACCGAC GGCGGCGGCAACCCGATAGGGCAGGCCACCGCCGATGGCAGCGGCAACTGGAGCTTCACTCCGGGCACACCGCTGACCAACGGCACGGTGATCAATGCGG
|
|
Amino Acid Sequence |
>glycoprotein
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
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|