Strain | Pseudomonas aeruginosa strain AZPAE12151 AZPAE12151_contig_31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGAAGTCCACGCATGTCCTACGACTACGAGAAAACCAGCCTCACCCTCTACCGGGCGGTATTCAAGGCCAACTACGACGGCGATGTCGGTCGCTACCT GCGTCCCGACAAGGAACTCGCCGAGGCTGCGGAAGTCGCCCCGCTGCTGCATCCGACCTTCGACAGCCCCAACACCCCTGGCGTCCCCGCCCGCGCGCCG GACATCGTCGCCGGCCGCGACGGCCTCTACGCCCCGGACACCGGCGGCACCTCGGTGTTCGACCGCGCCGGCGTGCTGCGCCGCGCCGACGGCGACTTCG TGATACCCGACGGCACCGACATCCCGCCGGACCTTAAGGTGAAGCAGGACAGCTACAACAAGCGCCTGCAAGCCACCCACTACACCATCATGCCGGCCAA GCCGATGTACCGGGAGGTCCTCATGGGCCAACTGGACAACTTCGTGCGCAACGCCATCCGCCGCCAATGGGAAAAAGCCCGCGGGCTCTAGGAGTGAACC
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DNA Sequence for Gene |
>NQ12_RS25150
ATGAACCTGAAACCCCAGACCCTGATGGTGGCGATCCAGTGCGTCGCCGCGCGCACCCGCGAACTCGACGCGCAGTTGCAGAACGACGACCCGCAGAACG CCGCTGAACTCGAACAGTTGCTGGTCGGCTACGACCTCGCCGCCGACGACCTGAAGAACGCCTACGAGCAAGCCCTGGGCCAATACAGCGGCCTGCCGCC CTATGACCGGCTGATCGAAGAGCCGGCATCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCCCGTGGGCAGGCCATCGTTGGCCTGCCCGCTCCAGCGCGCGCAGAGAAACGACAGATGGTCTTCGGCTGGCACGGCGACACCATCACCCGCGACAC CGCAGTGTGCCGCGACTAGCGCAACGCCCAGGACGTACGGCGCTTCCTCGTCGGGCTGTGCGGCGCCGACTTCCGCTTCGATCGTGCCTTCATGGCCTGG ATTGGCGACGGCGCGGCAAAATCCCTGAGTGAGGTGGCGGACGAACGGCGACGGCGCCACGCCGACACCAGCCCCTCCGCCTGAGCGAGCGCTCAGGCGC GGAAATGGCTCGGCGGCTGGCCGCTCCAGCGCTGGAAGGCATGGCGCAGGCTGGCGGTCTCGCTGAAGCCGAGTTCCTCGGCGATCCGGTAGATCGGCAT GTCGCCGCTCTGCAACAACTCCTTGGCGCGGGCGAAGCGCAACTCGTCGAGCAATTGCTGGTAGCTGGTGCGCTGCTGCTGAAGGTGCCGGCGCAGGCTG
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Amino Acid Sequence |
>hypothetical protein
MNLKPQTLMVAIQCVAARTRELDAQLQNDDPQNAAELEQLLVGYDLAADDLKNAYEQALGQYSGLPPYDRLIEEPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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