Pseudomonas aeruginosa AZPAE12153, NQ14_RS09500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCGTCGCCAGCGGCCAGCTCGAGGCTTTGCTCGATGAGCAGCAGCGAGCGCTGGCGGCGGTGCGGGCGAGCGCCGAGAGGCGCGCGAAGGACGCCGAG CAGGCACTCGGCGAGGCCAGGGCGCAGGCCGCGGAGCAGTACGCCGCGGCCGTGCGTCTGCTCCAGGAACCCGACATTGGCGTGGACTGCCAGGCGGCAG GTGCGGCGATCGACCGGGAGCTGGGACTATGACTCGTCTCCTGCTGGGGCTTTGTCTGCTTTTCGCGGGCTGCGCAGCCTCGCCGACGACACCTCGCCCC GTGCGCGTCGAGGTTCCCCTGGCAGTGCCTTGCCGTGTACCTGACGTGCGCCCGCCGAGCTGGGCCGGCGCCACGCTGAAGGCCGGCGATTCGCTGCAGG CCAAGGTTCGCGCATTGCTCGCCGAGCGCCGCCAGCGGCAGGGCTACGAACTCGAATTGCAGGCGGCATTGCGTGCCTGCCGCTGAGACACTGGGCGCAT
|
|
| DNA Sequence for Gene |
>NQ14_RS09500
ATGGACGTCGATGGACGTGTGTCCGGCGCATATTGCCGTGTATTGATTCCGCAGCGTTGTCGAGCCGGGAATCGGTCGGTACAACGTAGTCATGCTTGTA CAGGTGTGTCCCCCCAGGGATGTCACCTGCAACCTCAGAGCCCGGCCCGTGTGCCGGGCTTTTTCGTTTGCATCCGACAACGGCTCGGGACGTGGAGGCT CCTCGCCGACCGCGTACCGCGCCACGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGTCCTGGAGGCGGGGCCAGACGACCCGCCTGGTGCGGGTCTTTTCATGTGCATAAAGGAGAGTTTTCCATGTCCATCCTGACTCAAGGTACCCAGATC TACGCCCTGGTTCCGCCGGTATCCGGTACCGGTGCCGCTACCGTCCTGGAGATCGAAGGCGTGACCTCGTTCAACCCGGGCGGCAATCCGGCCGACCAGA TCGAAGACCCGTGCCTGAGCGACACTTCGCGCAAGTACAAGAAAGGCCTGCGCACCCCTGGCCAGGCGACACTCGGCATCAACGCCGATCCACGCCTGGC CAGTCACGTTCGGTTGTTCCAGCTGTCCGAGAAAGATGGCGAGACGAGCGTCAAGTGGGCCATCGGCTGGTCCGACGGAATCGACGTAAAGCCGACCGTC AGCACCGAAGGCGACGATTTCGTGCTGCCGCCGGCGCGCACCTGGTTCACCTTCGAAGGCTACGTCAGCGACTTCCCCTTCGATTTCGCCAGCAACACGC
|
|
| Amino Acid Sequence |
>hypothetical protein
MDVDGRVSGAYCRVLIPQRCRAGNRSVQRSHACTGVSPQGCHLQPQSPARVPGFFVCIRQRLGTWRLLADRVPRHG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|