Pseudomonas aeruginosa AZPAE12153, NQ14_RS09220
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGCAGTTGGCCCCGGAGCCGCTGATCCACGCGCTGCTGCTGCAACTGCTGTACGCGATTCCCAGCGAGCAGCAGTTGTACGAGCAATTGAACTACAAC CTGCTGTATCGCTGGTTCGTCGGCCTGGAAATGAAGCAGAAGATCTGGAATTTTCCGGTTTTCGTCAGCGATATAACCGTCCTGCTGAACAGCGCGGAGG CGGTAAGGATAATAGGCAGGATTATCGGGGAAGTGATTTCCGGGGATCTCATGCAGATGCCGGAGTTCTCCCTGAACTTCGCCTTGTTGCATACATGGCA AGCGCGCCATGGCGGAGCGCGACGGCTGAATATCTAGCACGAAAGTGAAAATAGAAAAGAACGAGATTTCATAAGGGCAGGCGCCGTTTTTAACAGGTTG TTCATGCGTCGCCGCTAGTTTGTTGTCTTTCACAGAACTGTTCGATGAACGGACTTGTTGCATTAGAACAATAAGTCCCGATGGAACTTCGGGGGACCGT
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| DNA Sequence for Gene |
>NQ14_RS09220
GTGAAGCGTTCGCTGTTCAATTGTGCGCACCCGTTTCGCCAGCGCTGGTCGATCGGTTGCCTGGCTGTCGCATTGTCGTGCGCTTCGCTGGCCGACGAGG CCCCTCCCGCCGCGGCGGGAGCCGAGACCCAGCGTCTGGTGGACATCAACGAGTACGTGGTACGCGGCAACACCGTGCTGGACAACCGCGCCATCGAGGC GGCGGTGTATCCCTTCCTCGGACCGCAGCGCAGCCTGGGCGACATCGAGGGGGCGCGCGATGCGCTGCAGGCCGCCTACCAGGAGAAGGGCTACCAGTCG GTCTACGTCGAGCTGCCGGAGCAGCAGGTGAGCGGCGGGGTGGTCTACCTGCAGGTCACCGAGACCACTGTCGGTCGCGTCCGGGTGGTCGGCGCCAAGC ACTATTCGCCGGTGGAGTTGCGCGAGGAAGTGCCGGCCCTGGAGGAGGGCAAGGTGCCCGACTTCGCCCAGGTCCAGCGCGAGCTGGCGCAGGTCAACCG CACCCCCGGCCGCCAGGTGCTGCCGATGGTGCGCGAGGGCCAGCGGCCCGGCACCATGGACGTCGACCTGCAGGTGGAAGACAAGAATCCCTGGCACGCC AGCATCGGCCTGAACAACGACTACAGCGCCGACACCCGTCACTTGCGCTCGGTGGTTTCGCTGGGCTACGACAACCTCTGGCAACTCGGCCACGCCATCT CGCTGACCTATTTCACCGCGCCGCAGGACCAGGACAACGCCAAGGTCTGGTCCGGCTCCTATACCGCGCCGCTGAGCCAGCGCTGGAGCGTGCAGCTGTC CGGCTACCAGTCCGACAGCGACGTGGCCACGGTGGGCAGCATGAATGTGGTCGGCCAGGGCCATTCCTATGGCGTGGCGGCGATCTACAGCCTGCCGGTG ACCGGCCTCTGGTCGCACTCGTTCTCCTTCGGCGTCGACTTCAAGGACTTCGAGGAACAGACCCGGATCGGCGGCAACAACGACAGGGTGCCGATCAAGT ACGCCCCGCTGACCCTCGGCTACAACGGTTTCCGCTACACCGAACGTTCCCAGTTGGCCCTTGGCCTGAGCCTGGTGGCCGGTACCGGCAGTCTCCTCGG CTACGGCGACGACGACGAGGAATTCGACCGCAAGCGTTATCGCGCCAAGTCCGGCTTCGGCGTGCTCAAGGGCGATCTCAACCACACCCTGACCTTCGGC GGCGACTGGCAGGTGGCGACCAAGGCGGCCTTCCAGCTCGCCTCCGGGCCGCTGATTTCCAACGAACAGTTCGCCGCCGGCGGTGCCACCAGCGTGCGTG GCTACCTGGCGGCGGAGAACACCGCCGACGACGGCTACCTGCTCTCCCAGGAATGGCGTACGCCGTCCCTCGGACGCTTCCTCGGCAAGCGCGCCGGCGG CTACGTCAACGACTGGCGCTTCTACGTGTTCGCCGAGGGCGCGCAACTGCGCCTGCAGGATGCGCTGCCCGAACAGGACGACGACTTCAGCCTGGCCAGC GTCGGCATCGGCACCCGCGCGCAACTCGCCGACTGGCTGTCCGGCAGCCTCGACTGGGCCTTCCCGCTGCTGGAAGGGACGAACACCGACAAACACGACT CGCGCCTGCATTTCAGCGTGCAGGCGAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTGACCCCGGAGTAACCCCACATGTATCGCTTATTGCTGACATCGCTGATCTGCCTGGGCCTGCTGGCCCCGGCCAGCGCCAGTGCCTGGTGGCAGGA CGACTGGCAGTACCGCAAGCAGGTCTCGGTCGATACCACCCCGCAAGGCGCGGCGATCAACGACAGTCTCGGTCGCCTGCCGCTGCTGGTGCGCCTGCAT ACCGGCAACTTCACCTTCGACGGGGTCAACGAGAACGGCTCGGACATCCGCTTCGTCGCCGCCGACGACAAGACCGTGTTGCGCCACCAGGTCGAGAGCT TCGACCCACTGATGGGCATGGCCCTGATCTGGGTCGACGTGCCGCGGGTGGAGGGTGGCCAGCGCCAGGACATCTGGATGTACTACGGCAACGCCAAGGC GCCGGAGAGCGGCAACGGCCAGTCGGTGTTCGACCCGGACTACACCCTGGTCTATCACTTCGACGGTGCGCCGGGCACTCCGCCGCGGGATTCCACCGCC
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| Amino Acid Sequence |
>membrane protein
MKRSLFNCAHPFRQRWSIGCLAVALSCASLADEAPPAAAGAETQRLVDINEYVVRGNTVLDNRAIEAAVYPFLGPQRSLGDIEGARDALQAAYQEKGYQS VYVELPEQQVSGGVVYLQVTETTVGRVRVVGAKHYSPVELREEVPALEEGKVPDFAQVQRELAQVNRTPGRQVLPMVREGQRPGTMDVDLQVEDKNPWHA SIGLNNDYSADTRHLRSVVSLGYDNLWQLGHAISLTYFTAPQDQDNAKVWSGSYTAPLSQRWSVQLSGYQSDSDVATVGSMNVVGQGHSYGVAAIYSLPV TGLWSHSFSFGVDFKDFEEQTRIGGNNDRVPIKYAPLTLGYNGFRYTERSQLALGLSLVAGTGSLLGYGDDDEEFDRKRYRAKSGFGVLKGDLNHTLTFG GDWQVATKAAFQLASGPLISNEQFAAGGATSVRGYLAAENTADDGYLLSQEWRTPSLGRFLGKRAGGYVNDWRFYVFAEGAQLRLQDALPEQDDDFSLAS VGIGTRAQLADWLSGSLDWAFPLLEGTNTDKHDSRLHFSVQASF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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