Pseudomonas aeruginosa AZPAE12153, NQ14_RS28020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_41, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCGTTCGGTCCAGCCTGGATCGGTGAGGTCGCACTCCACCACGCGGACCCGCTCGGCGAAACCGGCCAGCGCCGTACGCGCGATCTCCAGCAGCATG ACGTCGGCGTCCAGCGCCACCACCCGCGCCGCCGGGAAGCGTTCGAGCAGGCGCCGGCCGAGGGAGCCCGGGCCGCAGGCGGCGTCGATGGCGGTGAAGC GCCCGTCGCGGCCGAAGAGGTCTTCGAGCAACTGGAACATCGCCTCGTAGCGCTCCTCGCGCTGGCGGATGTAGCCCTCCTGCTGGCGGTCCCAGCGTTC GAGGAGCGCCATGATCTGCTCGGTTGCGGTCATCTTTCCTCCTGGGGGGCATGCCCGGTTGAGAGTGGGGTCCTGTGCTTCGAGGGATACGGCGAGCGAG ACGTTCCCTCGCCTCGATGAAGAAGAAACGGCGGGCATTCTTCATTCGAAGAAATGTTATGTTATAACTTATAAATATTCATAATTCATACCTACCGACC
DNA Sequence for Gene
>NQ14_RS28020
ATGACCCCCCATTCCTCCCCGCACCGTCTTCCTCCGCTGCGGCTGGCCCGCGCCGTGCCGTTCCTCTACCTGCTTCCCTGCCTGGCGCTGGCCGCGCCGG TCGACCTGGAGCCGACCGTGGTCAGCGCCACCACTACCGAGCGCAAGCTGCGCGACGCCCCGGCCAGCGTTTCGCTGATCACCGCCGAGGACCTGCGGCG GCGCCCGGTGCGCGACCTGCAGGAAGCCCTGCGCGGTTCGGAAAGCCTGCAGTTCAACGGCGTCGGCATGTCCCGGCGGGGCATCAGCGTTCGCGGCATG TCCAGCGAGCACACCCTGGTGCTGGTGGACGGCCAGCGGATCTCCACCTCGTCCGGGGCCATCGCCCATTCCGACTTCGACCTCGGCTGGGTGCCGGTGG AGAGCATCGAGCGTATCGAGGTGGTACGCGGACCGATGTCCTCGCTCTACGGTTCGGAAGCCCTCGGCGGGGTGGTGAACGTGATCACCCGGCGCGCCAC CGATACCTGGACGGGTAGCGGTCTGCTCGATGGCGGCGTGCGCGAGGACGGCCTCGGCGGGCAGAGCCACCAGCTCGGCGCCTATCTCGCCGGGCCGCTG GTGCCCGGCAAGCTGGGCCTCGCCCTGAACGGCGAGAGCCGCCGCCAGCAGGAAACCCCGGACGCCGATGAGCGCCGACTCTCCGAGCTGGAAGGCGGCA ACGCCGACAGCGGTGGGCTGAACCTCAGCTGGACCCCGGACGACGCCCAGCGCATCGACCTCGGCCACCAGCGCGGGCGCGAACGACGCTGGCGCAACAG CGAGACCGGAGGGTCGCGCTCGCGCTACTACGAGTCGCGCGACGTGATCGAACGCGAGCGCTGGTCGCTCGCCCACAATGGCCAGTGGGACTGGGGCAGC AGCCAGCTGCGCACCTACCGCAACCGCCTGGAGCGGCACAACGCGCGTTCCGACGGACAACCGCCGAGCAACCCGCAGCGCCTTACCGACAGCGTGGTCG ACGGCCACCTCAGCGTGCCGGCCTTCGAGCGACATCTCTTCACCCTCGGCGGCGAATGGCGCAAGGAAGAACTGGAGGATCGCTCGGTGAATACCGCCGG CGACGCCAGCGCGCGACACAAGGCGCTGTTCCTGCAGGACGAGATCGCCTTCGGCCCGGACTGGTCGCTGACCCTCGGCAGCCGCTTCGACAAGCACGAG GCGTTCGGCTGGGAAAGCAGTCCGCGCCTGTACCTGCTGCACCACCTTTCCGATGCGCTGACCCTGCGCGCCGGCGTCGGCCGCGGCTACAAGGCGCCGA GCCTGAAGCAGCTATCGCCGGAGTATGCGGCGGTCGGTGGCGGCGGGCGCTTCACCATCTACGGCAATCCCGACCTGAAGCCGGAGACCAATACGTCCTA CGAACTGGGCGCCGACTACCAGGGCGATGGCTGGTCGCTGAAGGGCACGGTGTTCGAGAACGATGTCCGCGACCTGATCCAGACCGTCTGCGTAGCGCGC TGCGGGGTGCGCGGCGGCGAGATACGCAACTACGAGAACGTCGACAGGGCACGGATCCGCGGCCTCGAGCTGGGCGGCGGCGTGGACCTGCCGGCGGACC TGCGCTGGGAACTCAACTACACCTACCTCGACGCGCGCAACCGCACCGCCGGCCAGCGCCTCGGCGATCGCTCCCGGCACCTCGCCAACAGCCAATTGCG CTGGAGCCCCAATGCCCGCTTCAGCGCCCAGTTGCGCACCGAATACGTCGGCAGCCAGGTGGCCTACAGCAGCAACGTCGGCTATGCCTTGCCGGCCTAC AGCCTTTGGCACCTGGAGCTGAGCCAGAAACTCAGCGAGAACCTGACGCTGCGCGGCGGCATCGAGAACCTTGGCGACCAGCGCCTGGCCGACGACGACA CGCACTTCACCTATGCCGAACCTGGGCGGACCTTCCATCTCGGTCTGGTGGCGAGCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCCGTTCGCTACTCTTCTGCGGCGCGCTGCTGGCCAGTCTCTGTGCCTGGGCGGAGTCGGCCCAGGTGCGTCTGCTCAGCAGCGATTTCGTCCTCCC GGGCAAGCACCAGCGCCTAGCCGGTTGGGCGCGCGAGGCCGGTGTCGAGTTGCGCGGCCTGCGCCTCGGCATCGGCGAGGCGCCGCCCGGCGAGTGGCTG GACGGCGGCAACCTGCTGATCCTCGACACGCCGCGGCCGACCGATCGCGCCCAGGTCGAGGAGGCGCTGGGCGAGCGCTTGCAAGGCGGGACGCAACCCT GGATCCGCGTCGGCGGCGGTCCGCCGGGTTTCGGCAACCTGCCGGCGGCGCTGGGCGGGCGCCTGGTCGGCTACTACGCGAACGGCGGCGAAGCCAACCT GCGCCGGCTGTTCGAGGCGGTCCGACGCTGGCATGCCGGCCTGCCCGTCGACGCGTTGCCGGCGCCGCAGCCCCTGGCGCAGGCCGGCTTCTATCATCCC
Amino Acid Sequence
>TonB-dependent receptor
MTPHSSPHRLPPLRLARAVPFLYLLPCLALAAPVDLEPTVVSATTTERKLRDAPASVSLITAEDLRRRPVRDLQEALRGSESLQFNGVGMSRRGISVRGM SSEHTLVLVDGQRISTSSGAIAHSDFDLGWVPVESIERIEVVRGPMSSLYGSEALGGVVNVITRRATDTWTGSGLLDGGVREDGLGGQSHQLGAYLAGPL VPGKLGLALNGESRRQQETPDADERRLSELEGGNADSGGLNLSWTPDDAQRIDLGHQRGRERRWRNSETGGSRSRYYESRDVIERERWSLAHNGQWDWGS SQLRTYRNRLERHNARSDGQPPSNPQRLTDSVVDGHLSVPAFERHLFTLGGEWRKEELEDRSVNTAGDASARHKALFLQDEIAFGPDWSLTLGSRFDKHE AFGWESSPRLYLLHHLSDALTLRAGVGRGYKAPSLKQLSPEYAAVGGGGRFTIYGNPDLKPETNTSYELGADYQGDGWSLKGTVFENDVRDLIQTVCVAR CGVRGGEIRNYENVDRARIRGLELGGGVDLPADLRWELNYTYLDARNRTAGQRLGDRSRHLANSQLRWSPNARFSAQLRTEYVGSQVAYSSNVGYALPAY SLWHLELSQKLSENLTLRGGIENLGDQRLADDDTHFTYAEPGRTFHLGLVASF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site