Pseudomonas aeruginosa AZPAE12153, NQ14_RS04900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAGGCTACAGCCATGTGCTCAACGGGCGCTTCAAGGGCGGCCACATCACCCGCCACTACGGCCAGCCGGAGCAGCACGTCCATGCCGTCCAGCTGGAGCT GGCGCAGTGCACCTACATGGACGAGCAGGCCCCGTTCGCTTACCGCGCGGACCTCGCCGAAGCGACCCGCGCAGTCATCCGCGAACTGCTGGAAAGCCTC CTCGCCTGGGGTCGCGAGCGCTACGCCTGAGGTGCTCGGAGGCGGCGGACGCCTGGCCCGTCCTGGCGGACGTGAATGCCGCGGATGGGGTGGGGCGTCC GCGTCGGCATTCTGGAAATTTTCTGTTACAAATTTATTGAGGTCAGCGTTGATGCGGCCGGGAGGCCGAGTGCGCAAAGAGTTGCACAACTGTTCTCCTC TATCCTCTCGGCCAGCATTTCCATCGCGCGGGCTCAGGCGCGTCGCGCCCGGAACCGAATACGCCAGGAACGCACGGCTGCGTTTCCAAGAGGACAGTGA
DNA Sequence for Gene
>NQ14_RS04900
ATGTTCGCCCCCGCCAACCAGACGCACTTCAGCCTTCGCATCGAAAACCTCCGGCACGACTTCCAGGTACTCGCCTTCCGCGGTCGCGAAGCCATCAGCC AGCCCTTTCGCTTCGACCTGGAGCTGGTCAGCGAGCGATCCGATCTGGACCTCGACGCGCTGCTGCACCAGCCGGCCTTCCTGATCCTCTCGCCGAGCGG GCAAGGGGTCCACGGACAGCTCACCAGCATCGCCCAGGGGGACTCCGGCAAGCGCCTGACCGGCTATCGCGCGACCCTGGAGCCGCGCCTGGCCTACCTG GGGCTGTGCAGCGACCAACGCATCTTCCAGCGCCTCAGCGTGCCGGAAATCATCGGTCGGGTGCTGGAGGGCCACGGCATTCTCGCCGACGCCTACCGCT TCCAGCTGGGTCCGACGCCGTACCCGGCCCGCGAATACTGCACGCAGTACGACGAAACCGACCTGGCGTTCCTCAGCAGGCTCTGCGAGGAGGAGGGCAT CCATTACCACCATGAGTTTTCTGCCCAGGGCCATGTGCTGGTCTTCGGCGACGACCAGACCTCCTTTCCGCGGCTGCAACGCCCCGTCGCCTACGTGCAG GACGCCGGGCTGGTCGCCGACCAGCCGGTGGTCAAGCGCTTCGGCGTGCGCTTCGACACCCGTGCCAGCCGGGTTACCCGGCGCGACTACGACTTCGAGC AACCCGCGTTGCAGATGCAGGCCACCCATGGCCCGCAGCTCGTGGCGCAGCAACCGGACCTGGAGGACTACGACTATCCCGGCCGCTTCACCCACCGCGA GCGCGGCAAGCACCTGAGCCGGCGCGCGCTGGAACGGCATCGCGCCGACTACCTACAGGCCAGGGGCGAAAGCGACGAACCGGCGCTGCTCAGCGGACAC TTCCTGACGCTGTCCGCGCATCCCCGCAGCGAATGGAACGATCTCTGGCTGCTTACCGAGGTTCTCCACGAAGGGCGGCAGCCGCAGGTACTGGAAGAGT CGATCGACAGCGACGTCGCGCAGGGCCAGGGCGATTTCCGCCAGGGCTATCGCAACCATTTCGTCGCCACTCCCTGGAGCGCGCATTTCCGCCCCCCGCT GGAGCATCCCAGGCCACGCGTGCTGGGCTGCCAGACAGCGGTCGTGACCGGCCCCGCCGGCGAGACCATCCACTGCGACCAATACGGCCGGGTCAAGGTG CAGTTCTTCTGGGATCGCCTCGGCCAGGCCGACGACAACACCAGTTGCTGGTTGCGCGTCGCCTCCAACTGGGCGGGCAAGCGCTATGGCGGCGTCGCCA TCCCGCGGGTGGGCATGGAAGTCCTGGTGGGTTTCCTGGAGGGCGATCCGGATCAGCCGCTGGTCACCGGCTGCCTCTACCACAGCGAAAACCGGGTGCC CTACGAGCTGCCGCAGAACAAGACCCGCAGCGTTTTCAAGACCGACAGCTACCCCGGCGGCGGCGGTTTCAACGAACTGCGCATCGAGGACCGCAAGGGC CAGGAACAGATCTTCGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCCACGAGCGCCACGACACGGTCGAGG GTGATAGCTACAGCGAGTTCAGGGCCGAGGAACAGCGCACGGTCCATGCCGACCGCAAGGTCGAACTGAAGGCGGCCGACCACCTCAGCGTCGCCGACGC GTTGCACCTGAGGATCGGCACCGGCCAGTTCGTCGAGGCGGGCGACGAGATCCATTTCAAGGCCGGCGACAAGGTAGTGATCGAGGCAGGCATGGAGCTG ACCCTAAAGGGCGGTGGCAGCTTCGCCAGGCTCGACCCGGTCGGTGTCACCCTCGACGGCGCCCAGGTGATGATCAACAGCGGCGGCAGCCCCGGCATCG GTAGCGGCGTTCGCGCGCTGTCGCCGCTGCAACCGCTCGCGGCCGACGCCGCGGCGGCGGGAGGCGCCTTGTTGGGAGCCATCGCCCAGAAGATCGGCGA AGCGCCGCAGAAACTCCTGCGTTTCGAACTCAGTCCGTTGCCCGGCGTGGCATCGGCGGCCAGGCAACCGTATCGGCTCTACGCCAACGGTGCCTTCAAG GAGGAGGGCATCGCCGACGAAGGCGGCGCAATCAGCTTCGAACCGCTGCCGGGCGAACGCACCTATCGTATCGAGACCGCCAATGGCCACGCCTACGAAG TGGAGATGGTCGACCAGCCGGACGCACTGCAGGCCGACGATCGGCTCGCCCAGCAGGGGTTCCGTGACTACCGGGCGGAAATGCCCCAGCACAAGCCGCG TTCCGCCCCGGACGCCTACCGGCGCGACGCCTCGCGGCCCGGCGCCGCCGACAAGGATGAGCCCACGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCTGTACAAACCGCAGACCCTCAAGCTGTACGCGCAACAGGCCGGCAGCGTCCGGCTGACCCTCGACTGGTTCGCCAACAAGGCTTTCTACCCGCC GCGCGCGGGTGTGCACATCAAGCCGCTGATCAATGGCCAGGCGGCCTTCGACGCGGTGCATGCGGCGATGGAAGCGGCCCGGCAGAGCATCGACATCATC ACCTGGGGCTTCGACCCGGCCATGCGCTTCAAACGCCCCGACGGACCGCGAATCGGCGAATTGCTGCAGACGAAGGGCCGCGAAGGGGTGCAGGCGCGGG TGCTGGTCTGGAGCAACCAGCTCGCCAGGCTCAAGGAAAACACCATCCCCGGGGCCGGCGTCGGCGGTTCCGGCGGCACCTGGGCGGGCTCGGGCGTCGC CAGCGGCAGCGCGGTGGACAACGAGGTGCTGCGACTGGAGCAGCGGCGCCAGCATAACCTCAACCTCATCGCGCGGCAGCAGGAAGCCCTGGAGCGCTCG
Amino Acid Sequence
>type IV secretion protein Rhs
MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQPFRFDLELVSERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYL GLCSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSRLCEEEGIHYHHEFSAQGHVLVFGDDQTSFPRLQRPVAYVQ DAGLVADQPVVKRFGVRFDTRASRVTRRDYDFEQPALQMQATHGPQLVAQQPDLEDYDYPGRFTHRERGKHLSRRALERHRADYLQARGESDEPALLSGH FLTLSAHPRSEWNDLWLLTEVLHEGRQPQVLEESIDSDVAQGQGDFRQGYRNHFVATPWSAHFRPPLEHPRPRVLGCQTAVVTGPAGETIHCDQYGRVKV QFFWDRLGQADDNTSCWLRVASNWAGKRYGGVAIPRVGMEVLVGFLEGDPDQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVADALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMEL TLKGGGSFARLDPVGVTLDGAQVMINSGGSPGIGSGVRALSPLQPLAADAAAAGGALLGAIAQKIGEAPQKLLRFELSPLPGVASAARQPYRLYANGAFK EEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDQPDALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDEPTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site