Pseudomonas aeruginosa AZPAE12153, NQ14_RS25960

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAGCTCCAGGCTCCATACCGCGAACTGCTGCCGGTAGTCGCGGCGGTACTGCTCGCGATTGGCGAACCACTGGCTGGCCGGCAGTCCGGCCAGTTCCTT GAACAGCTCCGCATCCTTCACCGCGACGAAATCCACGGCGATCGGCGAGTCGTCGTTGGCGCGCGCGGCGACATCCAGGGTCAGCCGCTGCAACTCGACC CGCGGCGCGAAGAAATACGAGCAGCCGGCCAGCGCCAGGATCGCCAGCGGCAGGGAGAGTTTCCGACATATGGTGAAACATCCGTGCTTCATGGGAGTCC AAAGAAAATTTTATTTTGCAAATCCATAGACCTGTTCTAGCGTCTTTTGTAGTTCGTCGCCAGTGACGGACCAGAGGGATCGCCAAGGACAGGTTCTGCG CCGTTTTCCCTGTCATGCCTGTGATCCAGCAAGGGACTGCGATGATCAGGGCATCCCCCCGATGCATTGCTCCCCCACCATTGCATCGGAGTCAGCCGCC
DNA Sequence for Gene
>NQ14_RS25960
ATGGCCGAGAGTACGCAGCACAAGCTGGACCGGGTGCGCCCGCCGCGCGTGCAGATCACCTACGACGTCGAGATCGGCAACGCCATCGAGAAGAAGGAGC TGCCCCTGGTGGTCGGCATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTCGAACGGCGTTTCGTCGACATCGATCGCGACAA CTTCAACGAGATCCTCTCCTCCATCTCTCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCGACGACAGCAAGCTGAACGTCGAGCTGCGCTTC AACCACATCGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGAAGCGCGCCAGCGCCTGCGCGACCTGCTGACCA AGCTCGACGGCAACGACGACCTCGACCAGTTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAGGAAATCAAAGCGGCCCGCCCGGAAGCCGAAGC GGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTCTTCCCGGAGAAGCCGCCATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATCGCC AAGGGCCGCATGGCCCACGACGACAGCCAGCAGGACTATGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACA AGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCT GGAAGCCTCCTGGCGCGGCCTGCACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTGCGCCTGCTGAACGTCGGCAAGAACGAACTGCAG AACGACCTGGAGAAGGCGGTCGAGTTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGCGGACACCCCTTCAGCCTGC
Amino Acid Sequence
>type VI secretion protein
MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPDTPPAKLVERRFVDIDRDNFNEILSSISPRATLQVDNTISGDDSKLNVELRF NHIEDFDPVNLVKQVVPLRRLFEARQRLRDLLTKLDGNDDLDQLLQDVVANTEGLQEIKAARPEAEAAPAGDSEPPADQPA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site