Pseudomonas aeruginosa AZPAE12153, NQ14_RS25955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_27, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAGATCGGCAACGCCATCGAGAAGAAGGAGCTGCCCCTGGTGGTCGGCATCCTCGCCGACCTCTCCGGCAAGCCGGATACCCCGCCGGCGAAGCTGGTC GAACGGCGTTTCGTCGACATCGATCGCGACAACTTCAACGAGATCCTCTCCTCCATCTCTCCCCGCGCCACCCTGCAGGTCGACAACACCATCAGCGGCG ACGACAGCAAGCTGAACGTCGAGCTGCGCTTCAACCACATCGAGGACTTCGACCCGGTCAACCTGGTGAAGCAGGTGGTCCCGTTGCGTCGCCTGTTCGA AGCGCGCCAGCGCCTGCGCGACCTGCTGACCAAGCTCGACGGCAACGACGACCTCGACCAGTTGCTGCAGGACGTGGTGGCCAACACCGAAGGCCTGCAG GAAATCAAAGCGGCCCGCCCGGAAGCCGAAGCGGCCCCGGCCGGCGACAGCGAACCCCCGGCCGACCAGCCGGCCTGACCCTCTTCCCGGAGAAGCCGCC
DNA Sequence for Gene
>NQ14_RS25955
ATGCCCAAGTCATCCGCCGCCGAACAATCCGGCGAGAGTTCGACCCAGACCCTGTCCCTGCTCGACGAGATCATCGCCAAGGGCCGCATGGCCCACGACG ACAGCCAGCAGGACTATGCCCGCGACATGCTCGCGGAATTCGCCACCCAGGTCCTCGACGAGGGCATGGCCGTCGACAAGGACACCGTGGCGATGATCAA CGACCGCATCAGCCAGATCGATGCGCTGATCAGCGACCAGCTCAACCAGATCATCCACCACCCCGAGTTGCAGAAGCTGGAAGCCTCCTGGCGCGGCCTG CACCAACTGGTGAGCAACACCGAGACCAGCGCGCGGCTCAAGCTGCGCCTGCTGAACGTCGGCAAGAACGAACTGCAGAACGACCTGGAGAAGGCGGTCG AGTTCGACCAGAGCGCACTGTTCAAGAAGATCTACGAAGAGGAATACGGCACCTTCGGCGGACACCCCTTCAGCCTGCTGATCGGCGACTTCACCTTCGG TCGCCATCCGCAGGACATCGGCCTGCTGGAGAAGCTGTCGAACGTCGCCGCGGCTGCCCACGCGCCGTTCATCGCCGCCGCCAGCCCACGCCTTTTCGAC ATGAACAGCTTCACCGAACTGGCCGTGCCGCGCGACCTGACCAAGATCTTCGAGAGCCTGGAGCTGATCAAGTGGCGCGCCTTCCGCGAGAGCGAGGACT CGCGCTACGTGTCGCTGGTGCTGCCGAACTTCCTCTTGCGCCTGCCCTACGGCCCGGAGACGCGACCGGTGGAAGGCATGAACTATGTCGAGGACGTCAA CGGCACCGACCACTCCAAGTACCTCTGGGGCAACGCCGCCTGGGTCCTGGCGCAGCGCATCACCGAGGCCTTCGCCAAGTACGGCTGGTGCGCGGCGATC CGCGGCGCGGAAGGCGGCGGCGCGGTCGAGGGGCTGCCGGCGCACACGTTCCGCACCAGCTCCGGCGACCTGTCGCTGAAGTGCCCGACCGAGGTGGCGA TCACCGACCGCCGCGAGAAGGAACTCAACGATCTCGGCTTCATTTCCCTGTGCCACAAGAAGAACAGCGACGTGGCGGTGTTCTTCGGCGGCCAGACCAC CAACAAGGCCAGGCTCTACAACACCAACGAGGCCAACGCCAACGCGCGCCTGTCGGCGATGCTGCCGTACGTGCTGGCGGCATCGCGCTTCGCCCACTAC CTGAAGGTGATCATGCGCGACAAGGTCGGCAGCTTCATGACCCGCGACAACGTGCAGACCTACCTGAACAACTGGATCGCCGACTACGTGCTGATCAACG ACAACGCACCGCAGGAAATCAAGGCGCAGTACCCGCTGCGCGAGGCGCGGGTGGATGTCAGCGAGGTGGCCGGCAAACCGGGGGCCTACCGCGCCACGGT GTTCCTCCGGCCGCACTTCCAGCTCGAGGAACTCAGCGCGTCGATCCGCCTGGTCGCCAACCTGCCGCCGCCGGTAGCGGCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCCGCCCCCGCCGGCAGCGCCGGCGGGGCGCCCTTCCCGTTCCAGACAGCCCCTCTCCAGGAGTCAGATGCGATGGATGCGATCATTCTCGATTTCGGC AGCGACATCAAAGGCGACAGCCTGCTCGTCGGCTACGAAAACAAGATCGAAATCATGTCCTACAGCCACAACGTGGCGATGCAGGTCACCAACGACGTCA GCAACTCGGAGCGCACCTCCGGCAAACCCCACGTCGGCGAATTCACCCTCACCAAGTTCATCGACACCTCGACCCCGACCCTCAACGAGTATTGCTGCGC CGGCAAGCCGATCGCCGAGGCGACCATCACCATCGGCCGCAACGCCGCCGAGGGCAACGGGCAGATCATGCCCTTCATCGTCTACACCCTGAACAACGTG GTGCTCTCCAACGTCAGCGTCAGCGGCGGCGCCGGCGGCAAGCCGGTGGAGACCCTGTCGCTGAACTTCACCAAGATCAAGTGGGAGCTGACCGCGCAGA
Amino Acid Sequence
>EvpB family type VI secretion protein
MPKSSAAEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDKDTVAMINDRISQIDALISDQLNQIIHHPELQKLEASWRGL HQLVSNTETSARLKLRLLNVGKNELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFD MNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLVLPNFLLRLPYGPETRPVEGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAI RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAVFFGGQTTNKARLYNTNEANANARLSAMLPYVLAASRFAHY LKVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSASIRLVANLPPPVAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site