Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_22, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGTCCCAGACGCTGATCCTGACCCGCTACGCCGCACGCACGAAGATGCCGGAAGGCGAGAGCCTGGGTGACCTGGCGCGGCACCGGGCGACCCTGGCGA TCCACCTGGGCGTCGCCCACCTGGCGAAGATCGTCGAGGAACTGCTGCCGCACTACGGCGCCGACTGCCCGGTCGCGGTGATCCACCGGGCCAGTTGGCC CGACCAGGAACAGGTTCGCGGCACCCTCGGCGACATCCTGCCCAAGGTCGCCGCCAGGAATTTCCGCCGCACCGCGCTGATCCTGGTCGGCGAGGTGCTG GCCGCCGAAGGCTTCGCCGACTCTTCGCTGTACCGCGCCGAGCATCGACATCTCTATCGACCCGGCGAATGAACCGCCGTCCTTAGGTTCGGCGCCGACC ACCGGCAGCACGCCTAGACTCGTCACAAGGCTTGCGACAGCGGGCCGGCACGGCTAGCGTTCAGCGCTGGCCCCTTTTTTCCTGAAGCCTTCGGACACCC
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DNA Sequence for Gene |
>NQ14_RS24030
ATGAAACGATTCCTCCTCGGTCTGGTTCTGCTGCTGGCGGTCGCCGCCGGCGTCCTCTACTTCGTCCCGGCTACCCTCCTCGCCAGCGTACGCACCGTCG AGCGCGGTCTCGCCGGTCTCAGCGAGCACAGCGTGCAGGTCGACAACCTGGAGATCGCCTACCTGGAAGGTGGCTCGGAGAAGAACCCGACCCTGTTGCT GATCCACGGCTTCGGCGCCGACAAGGACAACTGGCTGCGCTTCGCCCGGCCGCTGGCCGAGCGCTACCATGTGGTCGCCCTCGACCTGCCCGGCTTCGGC GACAGCAGCAAGCCGCAACAGGCCAGCTACGACGTCGGCACCCAGGCCGAGCGAGTCGCCAATTTCGCCGCCGCCATCGGCGTGCGCCGCCTGCACCTGG CCGGCAACTCCATGGGCGGGCACATCGTCGCGCTCTACGCGGCGCGCCATCCGGAACAGGTGCTATCGCTGGCGCTGATCGACAACGCCGGGGTGATGCC GGCGCGCAAGAGCGAACTGTTCGAGGACCTGGAGCGCGGCGAGAATCCCCTGGTGGTGCGCCAGCCGGAAGACTTCCAGAAGCTGCTCGACTTCGTGTTC GTCCAGCAACCGCCGCTGCCGGCGCCGCTCAAGCGCTACCTCGGCGAGCGCGCGGTAGCCGCGTCGGCGTTCAACGCGCAGATATTCGAACAACTGCGCC AGCGCTACATCCCGCTGGAGCCGGAACTGCCGAAGATCGAGGCACCGACCCTGCTGCTGTGGGGCGACCGCGTGCTGGACGTCTCCAGCATCGAGGTGAT GCGTCCGCTGCTGAAGCGGCCCAGCGTGGTGATCATGGAAAACTGCGGACACGTGCCGATGGTCGAACGCCCGGAGGAAACCGCGCAGCACTACCAGGCC TTCCTCGACGGCGTACGGAACGCCCAGGTGGCCGGTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAACGCGAACCGGCGCCTGGGCGCCGGTTCGGGGGAGCGGGAGCCGTCGCGAGGACGGCTCGGATCCAGGCCTCAGGCCTGGATCAGGTTGGCGATCTGC ACGTCCGGGTTGACGTCCTGCTCGTAGTCGACCCCAGCGACCTCGAAACCGAACAGGTTGAGGAACTCGCTCTTGTAGCCGGCGAAGTCGGTCAATTCGT AAAGGTTCTCGTTGGTTACCTTGTCCCACAGCTCCTCGACACGGGACTGCACTTCCGGCTGCAGTTCCTTGTAGTCGGCACGCAGGCGGCCTTCCTCGTC GAGGCGCGGCTCGGCGCCGTACAGGCTCTCCCGGTACAGGCCGTCGACCTGCTCGATGCAACCTTCGTGGGTACCCTGCTCCTTCATCACCTTGAACAGC AGCGACAGGTACAGCGGCATCATCGGGATCGCCGAGCTGGCCTGGGTCACCACCGCCTTGAGCACCGAGACGCGCGCGTCGCCGCCCAGCGGGGCGAGCT
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Amino Acid Sequence |
>alpha/beta hydrolase
MKRFLLGLVLLLAVAAGVLYFVPATLLASVRTVERGLAGLSEHSVQVDNLEIAYLEGGSEKNPTLLLIHGFGADKDNWLRFARPLAERYHVVALDLPGFG DSSKPQQASYDVGTQAERVANFAAAIGVRRLHLAGNSMGGHIVALYAARHPEQVLSLALIDNAGVMPARKSELFEDLERGENPLVVRQPEDFQKLLDFVF VQQPPLPAPLKRYLGERAVAASAFNAQIFEQLRQRYIPLEPELPKIEAPTLLLWGDRVLDVSSIEVMRPLLKRPSVVIMENCGHVPMVERPEETAQHYQA FLDGVRNAQVAGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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