Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGAACGCCACGGCGCGCAGTTGATCGTCAACGACGACGCCGAACTCGCCGCGCGCCTGGGCGTCGGCCTGCACCTCGGCCAGACCGACGGTTCGCTG TCGGCGGCGCGCGCCCTGCTCGGCCGCCAGGCGATCATCGGCGCCACCTGCCACGCCCAACTGGAACTGGCCGAGCAGGCGGTGGCCGAGGGCGCCAGCT ACGTCGCCTTCGGCCGCTTCTTCAATTCCAGCACCAAACCCGGCGCCCCCGCCGCCAGCGTCGAACTGCTCGACCAGGCCCGGCCGCGCCTGCACCTGCC GATCACCGCCATCGGCGGCATCAGCCTCGACACCGCGCCCGGCCTGATCGCCCGCGGCGTCGATCTGGTCGCCGTGATCCATGCGCTGTTCGCCGCCGCG TCCGCCGCCGAGGTGGAACGCCGCGCCCGCGCCTTCAGCGCCCTGTTCGAACCTGCCTGACGCCTCCGCGCCTCGCCCGAGAAGAGATAGAGAGCTAGCC
|
|
DNA Sequence for Gene |
>NQ14_RS20570
ATGTCCCGTTCCGAAACGCTGTTCAACAACGCCCAGAAACACATTCCCGGCGGGGTCAACTCCCCGGTGCGCGCCTTCAAGAGCGTCGGCGGCACCCCGC TGTTCTTCAAGCACGCCGAAGGCGCCTATGTACTGGACGAGGACGACAAGCGCTACGTGGACTATGTCGGCTCCTGGGGCCCGATGATCCTCGGCCACAG CCATCCGGACGTGCTCGACGCGGTGCGCCGGCAGCTCGACCACGGTCTGTCCTATGGCGCGCCGACCGCGCTGGAAGTGGAAATGGCCGACCTGGTCTGC TCCATGGTGCCGTCGATGGAGATGGTGCGCATGGTCAGCTCCGGCACCGAGGCGACCATGAGCGCCATCCGTCTGGCCCGCGGCTACACCGGGCGCGACA GCATCATCAAGTTCGAAGGCTGCTACCACGGTCACTCCGACAGCCTGCTGGTGAAGGCCGGCTCCGGCGCCCTGACCTTCGGCGTGCCGAACTCCCCGGG CGTTCCGGCGGCCTTCGCCAAGCACACCCTGACCCTGCCGTTCAACGACATCGAGGCGGTGCGCAAGACCCTGGGCGAAGTCGGCAAGGAGGTCGCCTGC ATCATCGTCGAGCCGGTTGCCGGCAACATGAACTGTGTGCCGCCGGCGCCGGGCTTCCTCGAAGGCCTGCGCGAAGCCTGCGACGAACACGGCGTGGTGC TGATCTTCGACGAAGTGATGACCGGCTTCCGTGTCGCCCTCGGCGGCGCCCAGGCCTACTACGGGGTCACCCCGGACCTGTCGACCTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTGGGCGCCTTCGGCGGCAAGCGCGAGATCATGCAGCAGATTTCCCCGCTGGGCCCGGTCTACCAGGCCGGCACGCTCTCGGGC AACCCGCTGGCAATGGCCGCCGGCCTGACCACCCTGCGCCTGATCAGCCGCCCCGGTTTCCACGACGAACTGACCGCCTACACCACGCGCATGCTCGACG GCCTGCAACAGCGCGCGGATGCCGCCGGCATCCCCTTCGTCACCACCCAGGCGGGCGGCATGTTCGGCCTGTACTTCAGCGGCGCCGACGCCATCGTCAC CTTCGAGGACGTGATGGCCAGCGACGTCGAACGCTTCAAGCGCTTCTTCCACCTGATGCTCGACGGTGGCGTGTACCTTGCGCCTAGCGCCTTCGAGGCC GGCTTCACCTCCATCGCCCATGGCGACAAGGAGCTGGAAATCACGCTGAACGCCGCCGAAAAAGCCTTCGCCGCGCTGAAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCTCTTCGCGGCGCCCTTCCCGGGCGCCGCCCTCCTCCCCGCCGGAACGCCTTCCTAGCCGAAATGCATAAACGCGCCGACAAAGTTCCCGAAAAGACA GTAAAGACTTTGTAAGGAGGCGTCGGCTTATTTCATAATGTGAGGGTCAGCGCATTTCGTTGGCCGGGCAGCCCTTGCCCGCCCCGATCCAGGAGGTGTC TTCCCCTCATGTTCCGTACCGGCCGCACCCTCGCCCTGGGTTGCCTGTTGATCCTCCAGCCGCTGCTCGCGCAGGCGGGAGGCAACTCGTTGCTGATTCC AGCGACCGGCCGCTGCGCGCTGAACACCGTTCCCGAAGAATTGCAACAGGCGCTCGCCGCCTGCCAGCAGGTCGCCAATGGCGGCGACGCCGAGGCGCAA TACGAACTGGGCGAATTCTTCTACGACGGCGAGCGCATCCCGCGCGACCTCCAGGCCGCCCTCAACTGGTTCGAGAAAGCTTCTCTACAGGGCCATGCCC
|
|
Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFNNAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVLDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRRQLDHGLSYGAPTALEVEMADLVC SMVPSMEMVRMVSSGTEATMSAIRLARGYTGRDSIIKFEGCYHGHSDSLLVKAGSGALTFGVPNSPGVPAAFAKHTLTLPFNDIEAVRKTLGEVGKEVAC IIVEPVAGNMNCVPPAPGFLEGLREACDEHGVVLIFDEVMTGFRVALGGAQAYYGVTPDLSTFGKIIGGGMPVGAFGGKREIMQQISPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHDELTAYTTRMLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADAIVTFEDVMASDVERFKRFFHLMLDGGVYLAPSAFEA GFTSIAHGDKELEITLNAAEKAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|