Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCACGTTTCCAGGAGGCCACAAGGATGCCTGCAATACCCCTGCGCGCCATGGTGCTGTGCGCCAACCCCGGCCGTTTGCTCAGGTACGGAGCGCTGTT CAACCGCTGCGGCTACTTCCACCTGAGCCTGTGCCTGGACCGACGGGAGCTGCGGCGCTCCCTGGACCAGGGTTACCCGTACGACTATTGCCTCTACGAC GGATTCCGCCTGGACCAGGGCTGCAAGGGCACGCTGGCGATGCTGGGACGCAGCGGCAGCATCCGGCGCTTCCTGCTGGTGGGCGAACTCGATTGCCGCG AGAAGCGCCTGTTGTTCGAGTGGAGCAGAGGCCATGGCCTGAGCATCGGCGCGGTGTCCGACCGGCCTTTGGGCCAGGTCGCCCTGGCTGCGTTGATCAA GCGTGATCGCGGCTGCCCCGACCTCCTGCGCGGCATCGCCTGAGGCGGCTTCCGGGGAGATGAGGTAAGGTCGTTTTCCAACCTTCCATGGCGAGACAGC
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DNA Sequence for Gene |
>NQ14_RS18555
ATGACCGTCCAGGCCGACATCCTCAAGGCGATCGAAGGCATCGAGCATGGCTTCCAGCAAGCCGGCCAGGCACTCTCCGAACGGATATTCCATTGCCGGC AGGTGCATGGCGCCGAGATCGTCGACGCGCGCTCGTTGTCGGAATCGGGACGGCATGCCGCCGACGGTGTTTTCAGCGAAGGGCCGCTGGCGGTCGCGGT GGTCACCGCGGACTGCCTGCCGATTCTCATGAGCAGTCGCGACGGTCGGGTGGTGGCCGCCCTGCACGGCGGCTGGCAGGGGCTCGTCGCCGGTATCGTC GGCGCGGCGGTGGCGCGCTTCAATGCGCGCGGCGTCGCCAGCGCGGACATCCGGGTCGCCATCGGTCCCGGGATCAAAGCCTGCTGCTACGAGGTGAGTG CCGGGTTCATCGAGGCGTTGCAGGTCGGCCACGGCCGCCTCTGGGAGGGCGCGGTGCCGCCCTGGAGCCAGCGTCGTCCGCTCCCCGAGCGGCCACCCCG GTTCGCTCCGCCCGAGCCAAGGCAGGCGGAGCAGGGCGCCTGGCTGGACCTGGTGGCCTTCTGTCGCCAGTTGTTCCAGGCCGCCGGCGTCGGGCCGGCG CAGATCGAAGCCAGCGCCGTCTGCACCTACTGTTCCGGCGATGCGTTCGCCAGTCATCGCCGACGCCAGCGCCTGGGCGAGGAGAAGCGTCAGCAGTACG CCTGGATCGCGCGCAAGCCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCGTATCGGTATTGTCCGGAAATCCTGGATAGTCATGACGGTTGTCTGCTGTTTATCCGCCAATACCCGGCTTCTAGACTTTCCCTGTCGATGCGTGG CTGTCGCCACGCTCATTCCAGGAGAGTCCCAGCATGCCTGACATCACCCAAGCCGCCATCGTCACCGGCGCCTCCCGCGGCATCGGTCGCGCCATTGCCC GGCGGTTGGCCGCCGACGGTTTCGCGGTCGCGGTCAACTATGCCGGCAACCAGACCATGGCCGACGAGGTCGTGGCCGAAATCGTCGCCGCCGGCGGCAC GGCCATTGCCGTACAGGGCGACGTGGCCAGCCCGGAGGACATGGACAAGCTGTTCGAAGCCACCAGGGGCGCCTTCGGCCGCATCGACGTGGTGGTCAAC AGCGCCGGCACGATGCCCTACCTGAAGATCGCCGACGGCGACCTGGAGGGCTTCGACCGGGTGATCCGCACCAACCTGCGCGGCGCCTTCATCGTGCTCG
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Amino Acid Sequence |
>hypothetical protein
MTVQADILKAIEGIEHGFQQAGQALSERIFHCRQVHGAEIVDARSLSESGRHAADGVFSEGPLAVAVVTADCLPILMSSRDGRVVAALHGGWQGLVAGIV GAAVARFNARGVASADIRVAIGPGIKACCYEVSAGFIEALQVGHGRLWEGAVPPWSQRRPLPERPPRFAPPEPRQAEQGAWLDLVAFCRQLFQAAGVGPA QIEASAVCTYCSGDAFASHRRRQRLGEEKRQQYAWIARKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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