Pseudomonas aeruginosa AZPAE12153, NQ14_RS18250 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCGCCGGGCAAGAAGAACAGCACCATCCACTTGTTGTCCGGCGGGGAAAAGGCGCTGACCGCGCTGGCGCTGGTATTCGCCATCTTCCAGTTGAACC CGGCGCCGTTCTGCATGCTCGACGAAGTCGATGCGCCATTGGACGATGCCAACGTCGGACGTTATGCGCGATTGGTGAAGGAGATGTCGGAAAAGGTGCA GTTCATCTATATCACCCACAACAAGATCGCCATGGAAATGGCCGATCAGTTGATGGGCGTGACCATGCATGAGCCGGGCTGTTCACGGCTTGTTGCAGTT GACGTGGAAGAGGCGGTCGCATTGGCTGAAGCCTGAGTGTCAGGCAGTGTAAACTTGTGCATGGGCATGTTAGTTTAATGGCCACTTTTTGTATCGCGTG GGAAAGTTCTGTCAGAACAAGGTTGGCTCCACGTTTCAAGGGACAGGACGTCCTTTTTTCATTTTTTATTCACCATTTTCACTAGGGGCTACGGAATTAC
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| DNA Sequence for Gene |
>NQ14_RS18250
|zipA
ATGGATATCGGTCTGCGCGAATGGCTTATCGTTATCGGGCTTATCGTGATCGCCGGCATTCTCTTCGACGGTTGGCGGCGGATGCGGGGCGGCAAGGGCA AGTTGAAGTTCAAGCTCGACCGCAGTTTCGCCAATCTGCCGGACGACGACGGCGACTCGGCTGAACTGCTGGGGCCGGCGCGCGTGGTCGAGCATCGCGA GCCATCCTTCGACGAACAGGACCTGCCCAGCGTCAGCGCCCGCGAAGCCAAGGAACGCAAGGGCGGCAAGCGCCAGGAAGAGCCGCGCCAGGGCGATCTG GACCTCGACGAGGGGCTGGCCCTGGAGGCGGACTCGAGCGATGCCGCCGAGACGGTGGAGCCGCGCAAGGGCAAGTCGAAGGGCCGCAAGGAGAAAGAGC GGGAGAAAGCCCCTGCGGTTGCTGCCGAACCTGCCCCGGTCGACGAGGTGCTGATCATCAACGTCATCGCCCGCGACGAGAGCGGCTTCAAGGGGCCGGC ATTGTTGCAGAACATCCTCGAGAGCGGCCTGCGCTTCGGCGACATGGACATCTTCCATCGCCACGAAAGCATGGCCGGCAATGGCGAGATCCTGTTCTCC ATGGCCAATGCGGTGAAACCGGGCACTTTCGACCTGGACGACATCGACAACTTCAGCACCCGCGCCGTGAGCTTCTTCCTCGGCCTGCCGGGGCCGCGCC ATCCGAAGCAGGCCTTCGACGTGATGGTTGCCGCCGCGCGCAAGCTGGCCCACGAGCTGAACGGCGAGCTGAAGGACGAGCAGCGCAGCGTGTTGACCGC CCAGACCATCGAGCACTACCGCCAGCGCATCATCGACCATGAGCGTCGCAGCCTGATGCAGAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGGCCACAGCCCCTTTCTTCGTACGGGAGGGGGCGAACTACTCTATAGAGCAGCCGAGGCTGCTCTTTTCGTTTCACGGACTCCCACCATGACCGACA CCCAGGCTGCCGCCGAACGCATCGCGCAACTGCGAACCGAACTGGACACCCACAATTACCGTTACTACGTGCTCGACGAACCGAGCATTCCCGACGCCGA ATACGATCGCCTGTTCCGCGAGTTGCAGGCGCTGGAGGCCGAGTACCCGCAACTGCTGACGCCCGACTCGCCGACCCAGCGGGTCAGCGGCACGCCGGCC TCGGCGTTCGGCGAAGTGCGCCATGAGATCCCCATGCTCAGCCTCGGCAACGCCTTTGAGGAGCAGGACCTGCTGGACTTCGACCGCCGCGTACGCGAAG GACTGGCCGACCTGTTGCCTGGCGGCGACCTGCTCGACGGTGGCGCGGAGGTCGAGTACAGTTGCGAGCCGAAGCTGGACGGCCTGGCCGTCAGCCTGCT
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| Amino Acid Sequence |
>cell division protein ZipA
MDIGLREWLIVIGLIVIAGILFDGWRRMRGGKGKLKFKLDRSFANLPDDDGDSAELLGPARVVEHREPSFDEQDLPSVSAREAKERKGGKRQEEPRQGDL DLDEGLALEADSSDAAETVEPRKGKSKGRKEKEREKAPAVAAEPAPVDEVLIINVIARDESGFKGPALLQNILESGLRFGDMDIFHRHESMAGNGEILFS MANAVKPGTFDLDDIDNFSTRAVSFFLGLPGPRHPKQAFDVMVAAARKLAHELNGELKDEQRSVLTAQTIEHYRQRIIDHERRSLMQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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