Pseudomonas aeruginosa AZPAE12153, NQ14_RS16215
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAAGGAGCGAGGACGTGCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCAACAGCTCGGTGCGCGGCTTCAAGGACCAGACCCTGACCGGCGACAGC GGCGGCTACTGGCGCAACCAGTTGCGCTGGCGGCGCGCGGTGGAATGGGCGCCGCTGCGGCCCTGGCTGCAGGAATACGGCGTGGCCTTCGCCTACGACG TCGGCGTGATCCGCCACGACCGCTACAACGACGGCGCCAGCGGGCGCATGAGCGGCAACGCCATCGAACTGGATGCCCGCGGCCGCTATTTCGCCGCCAG CGTCGGCTTCGCCCGCTCGCTGGAGCGGCCCAGCGCCATCGAGCGGCGCGAGCACCCGATCTATTTCCGGGTCGACGCGTTCTTCTGAAGACGCGGCGAC CTCCTGAACGCTTTAGGAAAGCGCCTACCTGCATCGAGGCCCTTTCCTTGGAAAACCTTGCTTAACCTCGCCGGGCCCCTACCCGCCAAGGAGTAACGAT
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| DNA Sequence for Gene |
>NQ14_RS16215
ATGGACATCCGCAGCCCGCTGAACCAGTGCATCGCCCTGTCCCTGGCCGGCATCCTGTTCCTCAACCCGATCGTCGCCGCGGCGGCGGGGCTGGCGCTGG ACAAGGCCGCCGGCGGCAACACCGGCCTGGGCCAGGCGGGCAACGGCGTGCCCGTCGTCAATATCGCCACGCCCAACGGCGCCGGGCTGTCGAACAACCA TTTCCGCGACTACAACGTCGGCGCCAACGGGCTGATCCTCAACAACGCCACCGGCAAGACCCAGGGTACCCAGCTCGGCGGGATCATCCTCGGCAACCCC AACCTCAAGGGCCAGGCGGCGCAGGTGATCCTCAACCAGGTCACCGGCGGCAACCGCAGCACCCTGGCCGGCTACACCGAGGTGGCCGGGCAGTCGGCGC GGGTGATCGTCGCCAACCCGCACGGCATCACCTGCCAGGGCTGCGGCTTCATCAACACGCCGCGCGCGACCCTCACCACCGGCAAGCCGATCATGGACGG CCAGCGCCTGGAGCGCTTCCAGGTGGACGGCGGCGACATCGTCGTCGAAGGCGCCGAACTGAACGTCGGCAACCTCGAACAGTTCGACCTGATCACCCGC AGCGCCAAGCTCAACGCCAAGCTCTACGCGAAGAACCTCAACATCGTCACCGGCCGCAACGATGTCCAGGCCGACAGCCTGCAGGCCACGCCGCGCGCCG CCGATGGCAGCGAGAAGCCACAGCTGGCGATCGACAGCTCGGCGCTGGGCGGGATGTACGCCGGGGCGATCCGCCTGGTCGGCACCGAGCAGGGCGTGGG GGTGAAGCTGGCCGGCGACATGGCCGCCAGCGGCGGCGACATCCGCATCGACGCCAGCGGCAAGCTGAGCCTGGCCCAGGCCTCCAGCCAGGGCGACCTG AAGATCGCGGCCCAGGCCGTGGAGCTGAACGGCAAGACCTACGCCGGCGGCAGCGCCGAGATTCGCAGCGCGGAGGAACTGGTCAACCGGCAGAGCCTGG CGGCGCGCGAACGCATCGCGCTGGAGGCGGCGCATATCGACAACGCCGGGGTGATCGAAGCCGGCGTCGAGCCAGACGAGCGACGCAACGCGCGCGGCGA CCTCGAACTGCGCAGCGGCACCCTGCGCAACGCCGGCAGCCTGGTGGCCAGCCGCGCGCTGGAAGCGAAGGCGAGCCAGGCGCTGGACAACCAGGGCGGC AGCCTGAAGGGGGCGACCGTCCGGGTCGACGCCGGGCACCTGAACAACCGTGGCGGCAAGCTGCTCGCCGAGGGCGAACTGCGGGTCGAGGCGAGCAGCC TGGACAACCGCCAGGACGGCCTGTTGCAGAGCCGGGACCGCGCCGTGGTCAAGACCCGTGGCGATCTCGACAACCGTGGCGGCCAGGTGATCGGCCTGAA CGATCTGGAGGTCGGTGCGGCGACGCTCGACAACGGCCAGCAAGGCCTGCTCGGCAGCCAGCAGTCCACCCGCGTCAGCGCCCAGGCGCTGGTCAACCGG GGGGACGGCGAAGTCTCCGGCAAGCGCGTCGAGGCCCGCGTCGGCAGCCTCGACAATCGCGGCGGCAAGCTGATCGGCGACGACCTGCTGGTGGTCGCCA GCGGTGCCATCGACAACCGCCTCGGCTTGTTCTCCGCGGCCAACCGCCTCGACCTGCGGGCGCGCAGCCTGGACAACAGCGGCAAGGGCACGCTGAGCAG CCGGGGCGGCCTGGAGGTCAGCCTCGGCGGCCTGCTGGACAACCGCGATGAAGGCAACCTGCTCAGCCAGGGCGCGCAGCGCGTGACGGTGGGGCAACTG GACAACCGCGCCGGCGGCCTGCTGTCGAGCCGCAGCGAGTTGAACGTCCACGGCGCCAGCCTGGACAACCGTGGCGGCGTGCTGGTGGCCGACGCCGGCC TGAGCGCCACGGGAGGCGCCTTCGACAACCGCGACGGCGGCAGCGCCAGCGGCAAGGCTGGTGTGCGCGTGGAGGTCGCCAGCCTGCGCAACGACCAGGG TGGCAAGCTGCTCAGCGATGGCCGCCTGGACCTCGCAGCGAACGCCGTCGGCAACGCCGGAGGGCGTATCGCCGCCAAGGGCGACCTGCAGGCGACGCTT GGCAGCCTGGCCCAGCAAGGTGGCGAATTGGTCAGCGAAAAGACCCTGAAGGTCGCGGCCGACACGCTCGACAACAGCCAGTCCGGGCTGATCGCCGCGA ATGGCGGCATCGCTATCGAGGCGCGGCAGGTCGACAACCGCGCCGGCGAGATTTCCAGCACCTCGAAGGTCGCCGTGAACGCCCGCGAGCAACTGGACAA CCGCGGCGGCAAGGTCATCGGCGACAGCGGCCTGCGCCTCACCGTGCAGCGCCTGCTGAACCAGGCCAAGGGGGTGCTGGCCGGGCGCGACGGCCTGAGC CTGGACGGCGGCGAACTGTTCAACGGCGACGGCGGGCGGCTCGACAGCCAGAACAGCCTGAGCGTGAGCCTCGGCGGCGTGCTGGACAACCAGGGCGGCG CGCTGGTCAGCGAAGGCAGCCTGACGGCGCGCGCCGCGCGCCTGGACAACCGTGGCGGGACCTTCTCCAGCGCCGGTGCGCTGGCGCTGACCAGCCAGGC CGCGCTGGACAACCAGGGCGGCAGGCTGCTCAGCGATGCCGGTGTGACGCTGAAGGGCGCCAGCCTCGACAACAGCCGTTCCGGCGTGATCAGCGCCAAG GGCGCGGTGGATATCCGCACCGGCGTGCTGGACAACAGCCGCAACGGCGGCATCGGCAGCAACGCCGGCATCACCCTGGTGGCCGCCCGGCTGGACAACG GCCAGCAGGGCCGGATCAGCGCCAAGGGCCTGCTCGACGCCAACCTGAAAGGCCTCGACCAGCGCGGAGGCGGCGTTCTGGTCAGCGAAACCGGCGTCAC CCTCGACCTCAATGGCGGCACGCTGGTCAACCGCGACGGCGGCCTGATCGCCACGCCCGGCGCGCTGCTGCTGCGCCAGCTCGGCGCGGTGGACAACGGC GCCGGCGGGGAAATCTCCAGCGACCGCGCCTTCACCCTCGCCGCCGCCAGCCTGGACAACCGTGGCGGGCGCCTGATCGGCGCCGCCAGCCTGACCCTGC GCATCGCCCAGGACCTGGACAACAGCCTGGCCGGGGTGATCTCCGGCGCCGCCGGCCTGGACATCGCGGCCGCTCGCCTGGACAACAGCGCCAAGGGCAC CCTGGCCAGCCGCGCCGGCATCGACCTGCGCGTCGATGGCGCGCTGGACAACCACGCCGAAGGCACCGTTTCCGGCGCCCGCCTGACGCTCGCCAGCGCC TCCCTGGACAACAGCGGCAAGGGCCTGCTCTCTGGCAACGCCGGCCTGAGCGTCGTCACTGGTGCGCTGGACAACGCCGAGGGTGGCCAACTGATCAGCC AGGGCGTGCTGGACGTCAGCAGCGCCGACCTCGACAACCGTGGCGGCGCCCTCAGTGGCAAGCAGTCGCTGCGCCTGAGCGCCGCCAACCTGGACAACCG TGGCGGCCTGCTCACCAGCGACGGCGAACTGGAACTGACGGCAGGGCGCGTCGATTCCGCCGACGGCGGCGAAATCTCCGCCCGGGGCGACCTGCGCCTG ACGGTCGAGCGCCTGGTGCAACGCCAGGGCCGGCTGATCGGCGAGCGCGGCGTCAGTCTCGACCTGCGGGGTGGCGACCTGGACAACCAGGGCGGCCTGA TCAGTGCCCGCGGCCCGCTGAGCATCGAGCGGCTGAACGTCCTCGACAACCGCCAGGGCGGCGAGATTTCCAGCCAGCAGGGCTTCGAGCTGCTGGCCAG GCGCATCGACAACGGCCAGCAGGGGCGCATCATCAGCGCCGGGAAACTGCGCCTGGACGCCGACGCGCTGGGCAACGCCGGTGCCGGCCTGCTCTCCGGA TGGCAGGGCCTGACGGTGACAGGCGGGAGCCTGGACAACAGCGCCGGCGGCACCCTTTCGAGCAAGGACGGCGAGCTGGCCATCAGCCTCGGCGGCGCGC TGGACAACCACGGCCAGGGCGCGCTGGTCAGCAAGGGCGCGCAACGGATCGACGCCGCCAGCCTGGATAACGCCCAGGGCATCGTCTCCGGCGAAAGCGA CGTGACCCTGAGCATCGTCGGGAAGCTGGACAACGGCCAGGGCGGCCTGGTCTCGGCGCAGCGCGCGCTGAGCTTCGAGCGCGACGATACGCTGCTGAAC AACGCCGGCGGCCGGATCAACGGCGGCAGCCTGCTGCTCAAGGGCGCCAGCCTGGATAACAGCGACGGCCAGTTGATCAGTCAGGGCCGGCTCGACGCCA TCCTCGGCGGCGCCCTGGTCAACGCCGGCGCGGCGCGCCTGGCCAGCGGCGGCGACCTGCTGCTGCGCAGCGCCAGCGTCGACAACCGCGGCGGCAAGCT GGTCAGCCAGGGGCTGCTGGAGATCAGCGCCGGCAGCCTCGACAACAGCGCCTCCGGCACCCTCGCCAGCCAGGCCGGCATGAGCCTGCGCCTGGGCGGC GGCGCCCTGCGCAACCAGCAGGACGGCCTGATCTTCAGCCAGGCCGGCGCCCTCGATGTGCAGGCCGGCAGCCTGGACAACCGCCAGGGCACGCTCCAGG CCCAGGGCGACAACCAGCTGCGTATCGGTGGCGCGCTGGACAACCAGGGCGGCCGCCTGGACAGCCGGGCCGGTAACCTCGACCTGCAGAGCGGCAGCCT CGACAACGGCGCCGGCGGCGTGCTCAACAGCGCCAAGGGTTGGCTGAAGCTGGTCACCGGGCTGTTCGACAACAGCGCCGGCGTCACCCAGGCGCAGTCG CTGGAAATCCGCGCCGGGCAAGGCGTGCGCAACCAGCAGGGCCATCTCTCGGCGCTGGGCGGCGACAACCGCATCGTCACCGCCGACTTCGACAACCAGG GTGGCGGCCTCTACGCCAGCGGCCTGCTCAGCCTCGACGGCCAGCGCTTCCTCAACCAGGGCGCGGCGGCGGGCCAGGGCGGCAAGGTCGGCGCCGGGCG CATCGACTTCAGCCTGGCCGGCGCGCTGGCCAACCGCTTCGGCCAGTTGGAAAGCGAAAGCGAGCTGCACCTGCGCGCCGCCGCGATCGACAACAGCGGC GGCAGCCTGCGCGCCCTCGGCCGCAGCGGCAGCACGCGGTTGGTCGCTGGCGGCCTGAACAACGCCTACGGCGTGCTGGAAAGCGCCAACCAGGACCTCG ACCTGCAACTGGGCAGCCTGGCCAACGCCGGTGGGCGCATCCTCCACACCGGCAATGGCACCTTCGGCCTGGATTCCGGGCAGGTGATCCGCGCCGGCGG CGAACTGACCACCAATGGCCTGCTGGACATCCGCGCCAGCGAATGGACCAACAGCAGCGTGCTGCAAGCCGGACGCCTGAACCTGGACATCGGCACCTTC CGCCAGACGGCCGAGGGCAAGCTGCTGGCGGTGCAGTCCTTCACTGGCCGCGGCGGCGACTGGAGCAACGACGGCCTGCTGGCCAGCGACGGCAGCTTGC GCCTCGACCTGAGCGGCGGCTACCGTGGCAACGGCCGCGCCACCAGCCTCGGCGACTTCGCCATGAACGCCGCCAGCCTCGACCTCGGCAACGCCGCCAG CCTCGCCGGCGGCGCCAATGTCACGCTCGGCGCCGGCAACCTGCTGGTCAACCGTGGGCGGATCACCGCCGCCGGCGACCTCGTGGCCAGCGCCGCGAGC CTGAACAACTACGGCACCCTGGGCGGCGGCGGCAACCTGCGATTGAACGCGCCCGCCCTGCTCAACGAGCGCGGATTGCTGTTCAGTGGCGCCGACATGA CCCTGCGCGCCGGCGACATCACCAACCTCTACGGGGATGTGTACAGCCTCGGCAGGCTGGATATCGCCCGCGACGATGCCGGCAACCGTGCCGCCAGCCT GCGCAACCTTTCCGGGGTGATCGAGAGCGGCAAGGACTTCAGCCTGCGTGCCAGCCTGATCGAGAACCGTCGCGCCGTGCTGGAAAGCAAGTCGGGCCTG TACACCGCGAAGATGGAGCAGACCGCCTGCATCGAAGGCGTCAACGCGGGCGACTGCAGCGGCAAGCGCAACGCCATCTGGACCATCACCCAGCGCGACA AGACCGAGGTCACCGCCAGCAGCGCCATGGGGCAACTGCTGGCCGGAGGCGACTTCGCCATCGACGGCGGCACCCTGAACAACCTTTCCAGTCTGATCGG CAGCGGCGGCAACCTCACCGCCAACCTCGAAGTCCTCGACAACCAGGGCCTGGAAACCGGCGAGCTGGAAACCATCCGCGTGCTGCGTACCGCTCGCGGC GGCGATATCGGCGGCATCGACCAGAAGTCGCGCAACTTCACCAACCTCTACTGGTACCAGAGCGCCAATTTCGACCCGGCGCGCGCGGGCGAGATTCCCG CCGCGCTCAACGCGATCCTCAGCGACTGGTCCTTCGAGTACGAATTCCCGAGCAAGGGGCCGACCCCGATCAGCAGTGGCGACCAGTCCTACGCAGCGGT GATCCAGGCCGCCGGCGACGTCACGGTCAATGCCAGCACGCGCATCGACAACGGCGTCACCCGCCCCGGCTACACCTTCGTCGGCAGCGGCCGCCAGGTG GGCGACAGCGCGGTGGGCGGCAGCGGGGTTTCGGTGGTCGTGCCGCTGACCTCGCAACTGCCGCCCGACCTGGCGCGGCGCCAGGTCAACCCGGTTACCC TGCCCGGCTTCAGCCTGCCCCAGGGCGACAACGGCCTGTTCCGTCTCAGCTCGCGCTTCGCCGAGGACGGCAATGGCAGCGCCGCGCTCGGTGCCGGCGC CGATCGCACCCAGGGCGGCAGCGGCGTCTCGGTCGGCCAGCAAGGCGCCGGCAACGTCGCCGGTACCTGGCAGGGCCAGGGCGTGCGAGTCGACGGCCTG GCTGGCGCGGCCAACGTCCAGGGTCAGGGCGGCAGCACGCTCGGCGGTAGCCTGCCGGGCGTCGCCCGGGTCCAGGGCGTGCCCGGCAACGCCACGCCGA GCGCCAGCCACAAGTACCTGATCGAGACCAACCCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCAGCGGCCTGGGCATGAACCC GGACGCTAGCAAGAAGCGCCTCGGCGACGGTCTCTACGAGCAGCGGCTGATCCGCGACGCGGTGGTGGCGCGCACCGGCCAGCGCTACATCGACGGGCTG AGCAGCGACGAGGCACTGTTCCGCTACCTGATGGACAACGCCATCGCTTACAAGGACAAGCTCCAGCTGCAACTGGGCGTGGGTCTGAGCGCGGAGCAGA TGGCGGCGCTGACCCACGACATCGTGTGGCTGGAAGAGGTCGAGGTGAACGGCGAGAAGGTCCTCGCGCCGGTGGTCTACCTGGCCCAGGCGGAGGGTCG GCTGGCACCTAACGGTGCGCTGATCCAGGGCCGCGACGTGAAGCTGGTGAGCGGCGGCGACCTGCATAACGTCGGCACCCTGCGCGCGCGGAACGACCTC TCGGCGACGGCCGACAACCTCGACAACAGCGGCCTGATCGAGGCCGGCAAGCGCCTCGACCTGCTCGCCGGCGACTCGATCCGCAACCGCCAGGGCGGGG TCATCGCCGGGCGCGACGTGAGCCTCACCGCGCTGACCGGCGACGTGATCAACGAACGCAGCGTGACCCGCTACGACAGCGCGCTCGACGGCCGCACCTG GGAGCGCAGCTTCGCCGACAGCGCCGCGCGGGTGGAGGCGGCGAACAGCCTGAACGTCCAGGCCGGACGCGACATCGCCAACCTCGGCGGGGTGCTGCAG AGTCGCGGCGACCTCAGCCTCGACGCCGGACGCGACGTCACCGTCGCCGCCGTCGAGGACCGCCAGGGCCAGACCCGCTGGAGCACGTCGCGGCTACAGA GCGTGACCCAGCTCGGCGCCGAAGTCAGTGCCGGGCGGGACCTGAACGTCAGCGCCGGGCGCGACCTCAGCGCAGTGGCCAGCGCCCTCGAAGCGCGCCG CGACATCGCCCTCTCCGCCGGGCGCGACGTGACCCTGGCGGCGGCGGCGAACGAGGAGCATGCCTACAGCAAGACCAGGAAGGTCACCTACCAGGAAGAC AAGGTCGCCCAGCAAGGCACCCGCGTGGATGCCGGGGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGCCTGATCGCGAGCCAGGCCAGCGCCGGTG ACGAGGCCTACCTGGTGGCCGGCGACAAGCTGGAACTGCTGGCCGCCAACGACAGCAACTACTACCTGTACGACAAGAAGAAGAAAGGCGACTTCGGCCG CAAGGAAACCCGGCGCGACGAAGTCACCGACGTCAAGGCGGTGGGCAGCCAGATCAGCAGCGGCGGCGACCTCACCCTGCTCAGCGGCGGCGACCAGACC TACCAGGGCGCGAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAAGCGGTGAAGGACCTGCACCAGGAGAGCCATG AGAAGAGCAAGGGCGACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTGCGCCAGAGCCAGATCGTGGCCCAGGGGAATCTGGC GATCAAGGCCGTGGAAGGGCTGAAGATCGACCTCAAGCATATCGACCAGAAGACCGTAAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTG GCGTGGCTGAAGGAGGCCGAGCAGCGCGGGGATGTGGACTGGCGCATGGTGCAGGAGGTGCACGATAGCTGGAAGTACAGCAACTCGGGGCTGGGGGCTG CGCCGTCACTGGCCATTGCCATCGTTGCGGCTGCTTACCTCGGCCCGGTGTATGGCGCAATGGCCAGCAATCTTGCGACCGGGACCATAAACAATGGCGG TGACTTCGGAAAGGGGCTGAAGTTTGCGACGAGCTCCAATGCTTTGAAGGGATATGCCGTTGCGGGTGCGACAGCTTATTTGGTCAGTCCGCAACTGGAT GAGATGTTTGGTGTAAGCACTGACAACGTCAATAAAGTCACTAAAGGATTTGACCTGAGCACTATGAGTGGTCTAGGTGGGTTCGCCACCTATTCTATCA TTCAAGGCCTCTCTCAAGCGGGTATGCAAACTGCCGCATTTGGTGGAAGTTTTGCAGACAACTTAGGTGATGCAATGGCCGGTCAAGCAACAAACTTGGC TATGGCTGCTGGATTCAATCTCATCGGTGATTGGGCTGATGGAAAGTTTGATTCTGGCTCTCCGCAAAAAGTTATGGTGCATGCCTTGATGGGAGGATTG CTCGCCCAGGCAACAGGTGGAGACTTCAAAACTGGGGCTATGGCAGCAGGGGCTAACGAAGCGCTTGTCAATGTGCTGTCTAACATGGCCGGTGGCGAAG AAAAGCTAGAGCTTATGGCCTCACAGCTAACAGGTCTTCTTGCTGCTACTGTAGTTGATGGAGATGTTGCGAAAGGGGCAGAGATTGCCAAGAATGCAAC GGCCTACAATCAGCAGGCTCACCGGGACGCTCTGAGTCGACTGAAAAGAGGAATGAGTGCGCTTCATGAACAAGGCAAGTATGCTGATCTCGAGCCGGAG ACAGTGCTTGCTGACCTGCAAAAAATAGCCAGTGGCGAAGCCAAAAGCGTTTCAGATTTGAACCCGAAAGTGGTTCAGTTTCTGAATAGTGAGTTTTCTC CTGCGAGCCTGAGAGAAACGTTGTTTGAGCCGGAGTCCTGGGAAGAGTATGCTGCGATAGCCGTCGATGTACTTTATCCAACGCCTGGGGGGAAGGCAGC AGCTATTGAGAAGGCTGGTGGTAAGCTGTCTAAAGAGGCGTTGGAAGCTCTGGAGAAGAAGTTTTCTTCTGATGCTTTAAAGAATGCACTATGGACTTCA ACGAAAAGTAAATCAGCCATTGAAAATGCATTTGGACATTGGCAGAAGCACAAGGGCGAGTTTCCAGAGTTTAAAAATGCCAAGCAGTACGTTGAAGGTA CGCAGAATTTCTTGAGTAGTCCGCCCCCGGGGACGTTAACCAAGACACGCCCAAATGGTGATACACTACTATTCGATCCAAAAACCAATACCTTCGGGGT AAAGGACGCAAATGGTGCGCCGCGTACCATGTTCAGGCCTCAGGACGGCATTAACTATTGGAATAGGCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGAGCCCAATGAGATATCCTTGCCCGTGCTGTGGATACTTAACTTTTGATGAGGAGCCGTGCGGAACTTATGAAATATGTCCCGTGTGTTACTGGGAA GATGACATTGCTCAGAATAAAGACCCTGATTATGATGGTGGTGCTAACGGGATAAGTCTGAACAATGCTAAAGAGAATTTTTTTAAATATGGAGCGATAA AGCGGGAATTTTTAAAAAACGTCAGGAAACCTTTGGATGACGAATCACTATGACCATAAGGGGTAAAGGAGCCCAAAGGGGTAAGCCAAAAAGAAAAGAT TTATTTTTACTACTCTAAGTCTAAAAGGCACATAAAGGGGACAGATTTATTTTCCCTACTCTAATTTTCTAAGCAGGGAGGCTTCAGCGCAGACGCCGTA AGGAGGCTCCGCGATGCCTAGGCAAGGGCGAGTGGTTTTACCGAATTATCCGCTTCACGTGGTCCAGCGGGGACACAATCGGCAAGTGGTATTCGCCGAG
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| Amino Acid Sequence |
>hemagglutinin
MDIRSPLNQCIALSLAGILFLNPIVAAAAGLALDKAAGGNTGLGQAGNGVPVVNIATPNGAGLSNNHFRDYNVGANGLILNNATGKTQGTQLGGIILGNP NLKGQAAQVILNQVTGGNRSTLAGYTEVAGQSARVIVANPHGITCQGCGFINTPRATLTTGKPIMDGQRLERFQVDGGDIVVEGAELNVGNLEQFDLITR SAKLNAKLYAKNLNIVTGRNDVQADSLQATPRAADGSEKPQLAIDSSALGGMYAGAIRLVGTEQGVGVKLAGDMAASGGDIRIDASGKLSLAQASSQGDL KIAAQAVELNGKTYAGGSAEIRSAEELVNRQSLAARERIALEAAHIDNAGVIEAGVEPDERRNARGDLELRSGTLRNAGSLVASRALEAKASQALDNQGG SLKGATVRVDAGHLNNRGGKLLAEGELRVEASSLDNRQDGLLQSRDRAVVKTRGDLDNRGGQVIGLNDLEVGAATLDNGQQGLLGSQQSTRVSAQALVNR GDGEVSGKRVEARVGSLDNRGGKLIGDDLLVVASGAIDNRLGLFSAANRLDLRARSLDNSGKGTLSSRGGLEVSLGGLLDNRDEGNLLSQGAQRVTVGQL DNRAGGLLSSRSELNVHGASLDNRGGVLVADAGLSATGGAFDNRDGGSASGKAGVRVEVASLRNDQGGKLLSDGRLDLAANAVGNAGGRIAAKGDLQATL GSLAQQGGELVSEKTLKVAADTLDNSQSGLIAANGGIAIEARQVDNRAGEISSTSKVAVNAREQLDNRGGKVIGDSGLRLTVQRLLNQAKGVLAGRDGLS LDGGELFNGDGGRLDSQNSLSVSLGGVLDNQGGALVSEGSLTARAARLDNRGGTFSSAGALALTSQAALDNQGGRLLSDAGVTLKGASLDNSRSGVISAK GAVDIRTGVLDNSRNGGIGSNAGITLVAARLDNGQQGRISAKGLLDANLKGLDQRGGGVLVSETGVTLDLNGGTLVNRDGGLIATPGALLLRQLGAVDNG AGGEISSDRAFTLAAASLDNRGGRLIGAASLTLRIAQDLDNSLAGVISGAAGLDIAAARLDNSAKGTLASRAGIDLRVDGALDNHAEGTVSGARLTLASA SLDNSGKGLLSGNAGLSVVTGALDNAEGGQLISQGVLDVSSADLDNRGGALSGKQSLRLSAANLDNRGGLLTSDGELELTAGRVDSADGGEISARGDLRL TVERLVQRQGRLIGERGVSLDLRGGDLDNQGGLISARGPLSIERLNVLDNRQGGEISSQQGFELLARRIDNGQQGRIISAGKLRLDADALGNAGAGLLSG WQGLTVTGGSLDNSAGGTLSSKDGELAISLGGALDNHGQGALVSKGAQRIDAASLDNAQGIVSGESDVTLSIVGKLDNGQGGLVSAQRALSFERDDTLLN NAGGRINGGSLLLKGASLDNSDGQLISQGRLDAILGGALVNAGAARLASGGDLLLRSASVDNRGGKLVSQGLLEISAGSLDNSASGTLASQAGMSLRLGG GALRNQQDGLIFSQAGALDVQAGSLDNRQGTLQAQGDNQLRIGGALDNQGGRLDSRAGNLDLQSGSLDNGAGGVLNSAKGWLKLVTGLFDNSAGVTQAQS LEIRAGQGVRNQQGHLSALGGDNRIVTADFDNQGGGLYASGLLSLDGQRFLNQGAAAGQGGKVGAGRIDFSLAGALANRFGQLESESELHLRAAAIDNSG GSLRALGRSGSTRLVAGGLNNAYGVLESANQDLDLQLGSLANAGGRILHTGNGTFGLDSGQVIRAGGELTTNGLLDIRASEWTNSSVLQAGRLNLDIGTF RQTAEGKLLAVQSFTGRGGDWSNDGLLASDGSLRLDLSGGYRGNGRATSLGDFAMNAASLDLGNAASLAGGANVTLGAGNLLVNRGRITAAGDLVASAAS LNNYGTLGGGGNLRLNAPALLNERGLLFSGADMTLRAGDITNLYGDVYSLGRLDIARDDAGNRAASLRNLSGVIESGKDFSLRASLIENRRAVLESKSGL YTAKMEQTACIEGVNAGDCSGKRNAIWTITQRDKTEVTASSAMGQLLAGGDFAIDGGTLNNLSSLIGSGGNLTANLEVLDNQGLETGELETIRVLRTARG GDIGGIDQKSRNFTNLYWYQSANFDPARAGEIPAALNAILSDWSFEYEFPSKGPTPISSGDQSYAAVIQAAGDVTVNASTRIDNGVTRPGYTFVGSGRQV GDSAVGGSGVSVVVPLTSQLPPDLARRQVNPVTLPGFSLPQGDNGLFRLSSRFAEDGNGSAALGAGADRTQGGSGVSVGQQGAGNVAGTWQGQGVRVDGL AGAANVQGQGGSTLGGSLPGVARVQGVPGNATPSASHKYLIETNPALTELKQFLNSDYLLSGLGMNPDASKKRLGDGLYEQRLIRDAVVARTGQRYIDGL SSDEALFRYLMDNAIAYKDKLQLQLGVGLSAEQMAALTHDIVWLEEVEVNGEKVLAPVVYLAQAEGRLAPNGALIQGRDVKLVSGGDLHNVGTLRARNDL SATADNLDNSGLIEAGKRLDLLAGDSIRNRQGGVIAGRDVSLTALTGDVINERSVTRYDSALDGRTWERSFADSAARVEAANSLNVQAGRDIANLGGVLQ SRGDLSLDAGRDVTVAAVEDRQGQTRWSTSRLQSVTQLGAEVSAGRDLNVSAGRDLSAVASALEARRDIALSAGRDVTLAAAANEEHAYSKTRKVTYQED KVAQQGTRVDAGGDLAINAGQDLRLIASQASAGDEAYLVAGDKLELLAANDSNYYLYDKKKKGDFGRKETRRDEVTDVKAVGSQISSGGDLTLLSGGDQT YQGAKLESGNDLAIVSGGAVTFEAVKDLHQESHEKSKGDLAWQSSKGKGQTDETVRQSQIVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQL AWLKEAEQRGDVDWRMVQEVHDSWKYSNSGLGAAPSLAIAIVAAAYLGPVYGAMASNLATGTINNGGDFGKGLKFATSSNALKGYAVAGATAYLVSPQLD EMFGVSTDNVNKVTKGFDLSTMSGLGGFATYSIIQGLSQAGMQTAAFGGSFADNLGDAMAGQATNLAMAAGFNLIGDWADGKFDSGSPQKVMVHALMGGL LAQATGGDFKTGAMAAGANEALVNVLSNMAGGEEKLELMASQLTGLLAATVVDGDVAKGAEIAKNATAYNQQAHRDALSRLKRGMSALHEQGKYADLEPE TVLADLQKIASGEAKSVSDLNPKVVQFLNSEFSPASLRETLFEPESWEEYAAIAVDVLYPTPGGKAAAIEKAGGKLSKEALEALEKKFSSDALKNALWTS TKSKSAIENAFGHWQKHKGEFPEFKNAKQYVEGTQNFLSSPPPGTLTKTRPNGDTLLFDPKTNTFGVKDANGAPRTMFRPQDGINYWNRQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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