Strain | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCTCGGCCAGCGTTTCCTGGAAGTCTGGTCGGGGCTGCCGGTGCTCTACCTGCTGATCATCCTGGCCAGCTTCGTCCAGCCGAACTTCTGGTGGCTGCTG GGCATCATGCTGCTGTTTTCCTGGATGAGCCTGGTGGACGTGGTCCGCGCCGAGTTCCTCCGCGGGCGCAACCTGGAATACGTCCGCGCCGCCCGGGCCC TCGGCATGCGCAACAGCGCCATCATGTTCCGTCACATCCTGCCGAATGCGATGATCTCGACCCTGACCTTCATGCCGTTCATCCTCACCGGCGCCATCGG CACCCTCACCTCCCTGGACTTCCTCGGCTTCGGCCTGCCGCCCGGCGCGCCGTCGCTGGGCGAGTTGGTCGCCCAGGGCAAGTCCAACCTCCAGGCACCC TGGCTGGGCATTTCCGCCTTCGTGGTGCTGGCGGTCATGCTGAGCCTGCTGGTGTTCATCGGCGAAGCCGCCCGCGACGCTTTCGACCCGAGGAAATGAG
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DNA Sequence for Gene |
>NQ14_RS15300
ATGAGCGAGAACATTCTGGAAATCCGCGACCTCGCCGTCGAATTCCTCTCCGGCGAGCAACGCCAGCGGGTGGTCGAAGGCGTCAGCTTCGACATCCGCC AGGGCGAGACCCTGGCCCTGGTCGGCGAAAGCGGCTCGGGCAAGTCGGTGACCGCCCACTCGATCCTGCGCCTGCTGCCCTACTCCGTCGCCAGCCACCC AGCAGGCAGCATCCACTACCAGGGCGAGGATCTGCTCAAGCTCCCGGAACGGCGCCTGCGCGGGATCCGCGGCAACCGCATCGCCATGGTCTTCCAGGAA CCCATGACCTCGCTCAATCCGCTGCATACCATCGAGAAGCAGCTCGCCGAGGTCCTCGCCCTGCACAAGGGCCTGGGTGGCGCCAAGGCCAGCGCGAGAA TTCTCGAACTGCTCGAGCTGGTCGGCATCCCCGAGCCGGCCAAGCGCCTGAAAGCCTATCCACACGAACTCTCCGGCGGCCAGCGGCAGCGCGTGATGAT CGCCATGGCCCTGGCCTGCGAGCCGCAACTGCTGATCGCCGACGAACCGACCACCGCGCTCGACGTCACCATCCAGTTGAAGATCCTCGATCTGCTCAAG GACCTGCAGGCACGCCTGGGCATGTCCCTGCTGCTGATCACCCACGACCTCAACCTGGTCCGGCGCATCGCCCACCGCGTCTGCGTCATGCAACAAGGGC GGATCGTCGAGCAGGCTTCCTGCCAGGAACTCTTCGCAGCCCCGCGACACCCCTATACCCGCGAGCTGCTCAACGCCGAGCCCAGCGGTGCGCCGGCAAG CAACCCGCCGGGTGAAACCCTGTTGGCGGTGGACGACCTGCGGGTCTGGTTCCCGATCCGCAAAGGCGTGTTCCGCCGCACCGTGGACCACGTCAAGGCG GTCGACGGGGTCAATTTCGAACTACCCCGCGGGCAGACGCTGGGCATCGTTGGCGAAAGCGGCTCGGGCAAGTCGACCCTTGGCCTGGCGATCCTGCGGC TGCTGGAAAGCCAGGGCGGCATCCGCTTCGAAGGCACCCGGCTGGACGGTCTCGCGCAACATGACGTGCGCCCGCTGCGCCGCGAGATGCAGGTGGTGTT CCAGGACCCGTATGGCAGCCTCAGCCCACGCATGTGTGTCGGCGAGATCGTCGGCGAAGGCCTGCGCATCCATAGGATCGGCAGCGAGGCCGAACAGGAG CAGGCGATCATCGACGCGCTGGTGGAGGTCGGGCTCGATCCGCAGACCCGCTACCGTTACCCCCACGAATTCTCCGGCGGCCAGCGCCAGCGCATCGCCA TCGCCCGGGCACTGGTGCTGAAACCGGCACTGATCCTGCTCGACGAACCGACCTCGGCGCTCGACCGCACCGTGCAGCGCCAGGTCGTGGAATTGCTGCG GCAACTGCAGGGCAAGTACAACCTCACCTACCTGTTCATCAGCCACGACCTGGCGGTGGTCAAGGCGCTCAGCCACCAGCTGATGGTGGTTCGACATGGC AAGGTGGTGGAACAGGGCAGCGCCGAAGCGGTTTTCGCCTCGCCGCAACATCCCTATACGCAGCAATTGCTGGAGGCTGCCTTCATGGCCCCGGCAAGCG CGGAAAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTAGCAGACAAGGAACGGACAATGGGATTTCTCACAGGAAAACGCGCCCTGATCGTCGGAGTCGCCAGCAAGCTCTCCATCGCTTCCGGCATCGCCGCCG CCATGCACCGGGAAGGCGCCGAACTGGCCTTCACCTACCAGAACGACAAGCTCAGGGGCCGGGTGGAGGAGTTCGCCAGTGGCTGGGGCTCGCGGCCGGA GCTGTGCTTCCCCTGTGACGTGGCCGACGACAGCCAGATCGAAGCGGTGTTCGCCGCCCTGGGCAAGCACTGGGACGGCCTGGACATCATCGTCCACTCC GTCGGATTCGCTCCAGGCGATCAGCTCGACGGCGACTTCACCGCGGTGACCACCCGCGAGGGCTTCCGCATCGCCCACGACATCAGCGCCTACAGCTTCA TCGCCCTGGCCAAGGCCGGACGGGAAATGATGAAGGGCCGCAACGGCAGCCTGCTGACCCTCTCCTACCTGGGCGCCGAACGGACCATGCCGAACTACAA
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Amino Acid Sequence |
>microcin ABC transporter ATP-binding protein
MSENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYSVASHPAGSIHYQGEDLLKLPERRLRGIRGNRIAMVFQE PMTSLNPLHTIEKQLAEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGGQRQRVMIAMALACEPQLLIADEPTTALDVTIQLKILDLLK DLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVEQASCQELFAAPRHPYTRELLNAEPSGAPASNPPGETLLAVDDLRVWFPIRKGVFRRTVDHVKA VDGVNFELPRGQTLGIVGESGSGKSTLGLAILRLLESQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSEAEQE QAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALSHQLMVVRHG KVVEQGSAEAVFASPQHPYTQQLLEAAFMAPASAEN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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