Strain | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCCGACAGGGCCGGCGAACTGCGGGTGATCGCCGGACGCTACGGCCGCCACCAGGGGCCGGCGCTGACCCACTCGCCGCTGGCGGTCTGGGACGTGCAG CTGAAGGCCGGCAAGCACCTCGCCCTCAACCTGCCCAAGGGACATACCTGCGCCGTGGTGGTCCTGCGCGGCACCCTCGCGGTCGGCGACGAGATCGTTC GCGAAGCCCAGGTCGCCCTGCTCGACCGCGACGACCCGCGGCTGGAACTGGAAGCCAACAACGACGTGCAGTTGCTGGTGCTCAGCGGCGAGCCGCTGGA CGAGCCGATCATCGGCTATGGCCCCTTCGTGATGAGCAGCCGCGAGGAAATCGACCAGGCCATCGAGGACTTCGAGAACGGGCGCTTCATCCGCGCCCAC TGAAGTCCGCCCCCCTACGACATGGCCCGCGCAGGAAGCGCGGGCCCGGCCGGGCTTTGCCCGAAATTCACGGACGACCACCCTGCAAGAGGAAATGGAA
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DNA Sequence for Gene |
>NQ20_RS04910
ATGAGCGCTCCCGCCAACTTCAACGGCCAGACCCCGAAGATCGATCCGGCCAACGCCGCCATGTTGCTGATCGACCACCAGAGCGGCCTGTTCCAGACGG TCAAGGACATGCCGATGACCGAACTGCGCGCCAACGCCACCACCCTGGCCAAGGTCGCCACCCTGGCGAAGATCCCGGTGATCACCACCGCCTCGGTACC GCAGGGCCCCAACGGCCCGCTGATCCCGGAGATCCACGAGGCCGCGCCGCACGCCCAGTACGTCGCGCGCAAGGGTGAGATCAATGCCTGGGACAACCCG GAATTCGTCGCCGCGGTGAAGGCCACCGGCAAGAAGCAACTGATCATCGCCGGCACCATCACCAGCGTGTGCATGGCCTTCCCCAGCATCGCCGCGGTAC ACGACGGCTATCAGGTGTTCGCGGTGATCGACGCCTCCGGCACCTACTCCAAGATGGCCCAGGAAATCACCCTGGCACGGGTGGTCCAGGCCGGCGTGGT GCCGATGGACACCGCCGCGGTCTGCTCGGAAATCCAGCGCACCTGGAACCGCGACGACGCCGTGCAGTTCGCCGAAGCCTACAGCGCGGTATTCCCGCAC TACCAACTGCTGATCGAGAGCTACGCCAAGGCCCAGGCCGTGGTCAACAACCACGAGCAACTGGATTCGCAGCGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCATGGGAAGGAAGGGGCTGCACGCCCCTTCTTTTGCCGAGCAGGAGCCTGGTGGACAGCAACGACTACGGACCGGACCCATGCCTGATTCCTCCATGA AGCGCGGGGCTACGCTCTGCCTTGCCCTTGCCATAGGTCCGGGCTCGACCCTCGCCGACGACTCCCTGGGCCATCGCGACAACATCAGCACCGGCCTGAA CCAGCGGCAGAAAGCCGAAATGAAGGTGCCGCCGGGCTTCGTCGAAGGCTCGACGCTGAACGGTTTCATCCGCAACTACTATTTCGCCCGCGACAACCAC GACACCCCGTCCCGCCGCGACCAGCGCGAATGGGCCCAGGGCCTGATGCTGTCGTTCCGCTCCGGCTATACCGACACGCCGATAGGCATCGGCCTGGATG CGCACGCCTTCTACGGCCTGCGCCTGGACGGCGGGGGTGGCAGCGGCGGCGCCGGCGTGCTGCCGCTGGACTCCGCCGGTCGCCCCGCCGACAGCTTCTC
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Amino Acid Sequence |
>nicotinamidase
MSAPANFNGQTPKIDPANAAMLLIDHQSGLFQTVKDMPMTELRANATTLAKVATLAKIPVITTASVPQGPNGPLIPEIHEAAPHAQYVARKGEINAWDNP EFVAAVKATGKKQLIIAGTITSVCMAFPSIAAVHDGYQVFAVIDASGTYSKMAQEITLARVVQAGVVPMDTAAVCSEIQRTWNRDDAVQFAEAYSAVFPH YQLLIESYAKAQAVVNNHEQLDSQRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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