Pseudomonas aeruginosa AZPAE12411, NQ20_RS27475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_47, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGAAACCAGCACCTTGCCGACGCCGAGCGCACGCATCACCTCGCCGATCCCCACCGGCGGGATGTAGGAGCGGGCGTCGTTCATCCAGCCGCGCATCGC CGGGTCCAGCGACAGGTACTCGTTCTTCACCAGAATCTGGCCCTCGGCCGGTTCGCCGAGCGGGGTTTCGACGAAACTGAAGGTGTCGCGGCCGGGCAGC CCGCTGGGACGCTGGGCCAACTGGTATTGCCGATTGATCTGGGAGGTCATGGCAGGGCACTCGAATGTCGGGAAACAGGCCCCTAGGGATAGCTGGCGCC GGCGCCGGCGGCAAGCGAAGGCGAGTGCGGAAATGACCGGTCATCTATGCCGATGATTCGCCGCCATCAGTCTTATCAGCGGGCTGGATGGCCCATCCTC CAGTCCCCTGATAGTGCTATGCCTTGCGCCGGCCCTGGCTAGACTGGCGCGGCCCGGTTCCGTCGCAGTTGGCGGAAGGCGATTTTCCGAGGAGCAGCAG
DNA Sequence for Gene
>NQ20_RS27475
ATGAGCAAACTTCTTTCCGGCCAGGTCGCACTGGTCACTGGCGGTGCGGCGGGCATCGGCCGCGCTACCGCGCTGGCCTTCGCCGCCGCCGGGGTCAAGG TGGTGGTCGCCGACCTGGACAGCGCCGGCGGCGAGGGCACGGTCGAAGCGATCCGCCAGGCAGGTGGCGAAGCCGTCTTCATTCGCTGCGACGTCACCCG CGACGCCGAGGTCAAGGCGCTGGTAGAGGGTTGCGCGGCGGCCTACGGCCGTCTCGACTACGCCTTCAACAACGCCGGTATCGAGATCGAGCAGGGCAAG CTGGCCGACGGCAACGAAGCCGAGTTCGACGCCATCATGGCTGTCAACGTGAAGGGCGTCTGGTTGTGCATGAAGCACCAGATCCCGCTGATGCTGGCCC AGGGCGGTGGCGCGATCGTCAACACCGCCTCGGTCGCCGGGCTCGGCGCGGCGCCGAAGATGAGCATCTACGCTGCTTCCAAGCACGCGGTGATCGGCCT GACCAAATCGGCGGCGATCGAGTACGCGAAGAAGGGCATCCGCGTCAACGCCGTGTGTCCGGCGGTGATCGACACCGACATGTTCCGCCGCGCCTACGAG GCCGATCCGCGCAAGGCCGAGTTCGCCGCCGCGATGCATCCGCTGGGTCGGGTCGGGCGGGTCGAAGAAATCGCCGCCGCGGTGCTCTATCTGTGCAGCG ACAACGCAGGCTTCACCACCGGTATCGCCTTGCCGGTGGACGGCGGGGCGACGGCGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGGCGGCGATACAACCGGGATGCCCCGGCGCGGGGCATTCGCATTCTGTTACAGGTCGGCGCGCGGTTTGGCGCGCCAGGCCACTGCCGGGGGACTAA CCTGGGTCGAGAATCCGGGGCCTGAGCCCGTCTCCATCGCATCGGAGCAATAACAATAATGACCGCCGATCCCATCCTGACCCTGTTCCTCCCCATCGCC CTGGGCATCATCATGCTCGGTCTCGGACTGTCCCTGACCCCGGCCGACTTCCTCCGCGTGGTGCGCTACCCGAAGCCGGTGCTGGTCGGCCTGGTGTGCC AGATCGTCCTGCTGCCCCTGGCCTGTTTCCTGATCGTCCAGGGCTTCGCCCTGGAGGCGGCCCTGGCGGTCGGCATGATGTTGCTGGCGGCCTCGCCCGG CGGCACCACCGCCAACCTCTACAGCCACCTGGCGCATGGCGACGTGGCACTGAACATCACCCTGACCGCGGTGAACTCGGTGATCGCCATCCTCACCATG
Amino Acid Sequence
>short-chain dehydrogenase
MSKLLSGQVALVTGGAAGIGRATALAFAAAGVKVVVADLDSAGGEGTVEAIRQAGGEAVFIRCDVTRDAEVKALVEGCAAAYGRLDYAFNNAGIEIEQGK LADGNEAEFDAIMAVNVKGVWLCMKHQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE ADPRKAEFAAAMHPLGRVGRVEEIAAAVLYLCSDNAGFTTGIALPVDGGATAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site