Strain | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_46, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGTACCGCGGTGATTTCGCCATCACCGAGATCCGTCCCTCCTACTACACCACCGGCGGCCGGCTGGTCGTCGAGATCCGCGCCAAGCTCGACAGCATGA CGCTGGACGACGTGGACAACCTCAGCGACGAGGAGGCAGAGCGTCTCTCTGGCAATGAGGTGGATCCGCTCGACGAAGTGCCCGCGATACAGCAACCCAC TGCCGCACCGGCGGCACCGCCGAAGTCGCCCCCGAAACCGAAGCCTCTGCGCCCCGTTGCAACTGGGGACGACGCGCCTTTCGGTATGGACCCTCCGGCT TCTGCAAAGCAGGCCGCCCCTCTGGACACAGATGCGGATGCAGAACTGTTCGGGACGGTCTGGCCGCTAGGCGAAATCGTCAAGATGGACACCACGGTCG ACCGCAAGCGACTACGCCAACAGTGCGTGCGACTCGGCGCGCTGGGCTATGAGCTCGACTTCAAACAACAGGTGTGGACCCGCAAGGAGGCCGCATGAAC
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DNA Sequence for Gene |
>NQ20_RS26635
ATGAAATCGATCTACAACACCCCAGGCTTCAGCGAGGAGTTGTTGCTGGTTTGCGCCTCGCTGCGCGAGGTCGGACTGGACAATCTGGCTGACCAGTTCC GCGCGGCAGTGTTCGACCGATCTGTCGTCGACCAGGCCATCATCGCACTGCGTGAGCGGGTGAAGACCCCTTCGCCGGAGCATGCGGCCGACAACGAGCC CTGGTTGTACTGCGACTGGCAGGCCAGGCAAACAGCTTACCGGCTCCTCCAGCGCCTTGAGCGCGCAACACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCAACACCCTACCAACCCCTGCCGGGCTCTCCCGTCAGGGAGACCTGGCCAACCACAGGAGCACACCTATGGGATGGCTTTTCTCATATCAGACGAAGG AAGACCTGCTGCGTGAGCTGCTGGCCCCAACCAGTACCTTCGCAGGCAGCACCGAGGTGCTGGCACACGCAGTCTCCGGCAATGAACTTTGGACTGTCGT AAAACGAACCTTTCACCTTGCCGGATTCTATTTCGGCAAGCCGGCCGGTCACTCGATCACCATGATCGAGCTGCACTTGCTGGACTGCTTGGCCGGGCAA TGGGGCTACAAGACCATTCCGGAAAGCGCCGGCCCGTTCTACTACGGCTGTCCGCTGGAGCTCCTGGACCTGGCTCACGATGAGATCAACCAGGAATGGC GTGAACGCCTGACGCACGAACACCAAGCCTGACCGCACCAACCACTTCCCTTGAGGGGCTCCCTCAAGGGCGCTCCTCGTCTACCACCGGGAGCACACCA
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Amino Acid Sequence |
>hypothetical protein
MKSIYNTPGFSEELLLVCASLREVGLDNLADQFRAAVFDRSVVDQAIIALRERVKTPSPEHAADNEPWLYCDWQARQTAYRLLQRLERATR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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