Strain | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGGACAACCTCACCCAGGGCATCGTCGCCCGCGCCGGCAACGACCCGCGCGAGATCGGCGCAGCCTCGGTGGAATACCTGCATCTGTTCGGCTATACCGC CTACGCCTACCTCTGGGCGCGCATGGCCGCCGCCGCGCTGCGCCAGCGCGAGGTCGACCCGTCGTTCCACGACGGCAAGCTGGCCACCGCGCGCTTCTAC TTCGCCCGCATCCTGCCCCGCGTGCACTCCCTCGCCGCCGCCGTCGAAGCCGGCAGCGAAAGCCTGTACGGCCTGGAGGCGGAACAGTTCTGAAGCTTCC GTCGAGCATTGTCGCGCGGCCCGTGGGCCGCGTGTTTTTTCCGGGACAGCATGCAACGCGCTGTCCGCCGACAGCCCGCGATAACGGCGGATAACCGCGA AGCGGTTATTCGCCCTACGACGCCCGGGAAGCCGGCCAGGCATTCTTGAAAAACGACGCAACCGCCGGTTATTCGCTAGACCAGGAACAAGGACATATCC
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DNA Sequence for Gene |
>NQ20_RS15735
ATGCGAACCCTCACCACCCTCCTCGGCAACAGCCAGAAACTCGACGGCGGCGCCATGTTCGGCAATGCCCCGCGCGCGCTCTGGTCACGCTGGATGCAGC CCGATGCGGAGAACCGCATCGACCTCGGCTGCCGTGCCCTGCTGGTGCGCGACGGCGAGCGCAACGTACTGGTGGAGGCCGGCATCGGCGCGTTCTTCCC GCCCGCCCTGCGCCAGCGCTACGGCGTCCAGGAAGAGCGCCACGTACTGCTCGACAGCCTCGCCGCGGTCGGCCTGGACGACGCCGACATCGACGTGGTG CTGCTCACCCACCTGCACTTCGACCACGCCGGCGGCCTGCTCGCCGCCTGGGAAGAAGGCCAGCCGGCGCGCCTGCTGTTCCCCAACGCGCATTTCGTCA GCGGCCGCCGCCACTGGCAGCGCGCGCGCCAGCCGCACCCGCGCGACCGAGCCTCGTTCGTGCCGGAACTGCTCGACCTGCTGCAGGCCAGCGGACGCCT GGAGCTGCTCGACGACGGCGAGCGCTCGGCGCACCTGGGCGAGGGCTGGCGTTTCCATTTCAGCGAAGGCCATACCCCGGGCCAGATGCTCCCGGAGATC GCCATGCCCGACGGCCCGGTGGTATTCAGCGGCGACCTGATCCCCGGCGCACCCTGGGTACACCTACCGCTGACCATGGGCTACGACCGCTTCCCGGAAG GCCTGATCGAGGAAAAGGAACGCCTGCTGGACAGCCTCATCGCCCGCAACGGCCGACTGGTCTTCACCCATGATCCGTGCGTCGCCATGGGCCGGGTGCG ACGCGACGAACAGGAGCGCTACAGCCTCTACGACATCCTCGAGCGGGTCGAGAACCTCGAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAAAGGCGCGGCCCGCCCCGGCGGCGGGCCGCGGGAATCAGGAACGCGCCTTGCGCGCGCCCTTGCAGCGCTCGATGCCGAGCCGGCAGATCCGCTCG CAGAGTTCGGCGAAACCGATCCCGGCCGCCGCCGCGGCCTGCGGCAGCAGGCTGGTGGCGGTCATGCCCGGCAGGGTATTGACCTCCAGGCACCAGAGCC GGCCCTGTTCGTCGAGGCGGAAGTCGGTGCGGCTGTAGCCGCTCAGCTTCAGCGCCCGGTGTACCTTCAGCGCCAGACGCTGGGCCTCGGCGGCGATCGC CGGCGGCAGGTCGGCGGGAAACACCTCGCGCACCGCGCCGGCCTGGTACTTGTGCTCGTAGTCGAAGACCTCCTGGCCGCCGAGGAGAATCTCGCCCACC GGCAGCGCCTGGTCGTCGAGCACCCCGACGGTGACCTCGCGGCCGGCGACGAAGCGCTCCAGCATCACCTGGTCGCCATAGCGCCCGGCCAGCTCGATGG
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Amino Acid Sequence |
>beta-lactamase
MRTLTTLLGNSQKLDGGAMFGNAPRALWSRWMQPDAENRIDLGCRALLVRDGERNVLVEAGIGAFFPPALRQRYGVQEERHVLLDSLAAVGLDDADIDVV LLTHLHFDHAGGLLAAWEEGQPARLLFPNAHFVSGRRHWQRARQPHPRDRASFVPELLDLLQASGRLELLDDGERSAHLGEGWRFHFSEGHTPGQMLPEI AMPDGPVVFSGDLIPGAPWVHLPLTMGYDRFPEGLIEEKERLLDSLIARNGRLVFTHDPCVAMGRVRRDEQERYSLYDILERVENLEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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